Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03773 ATGTCCAACGATCATTCTCATGCTCCTAATCTTTATGCCAAAGGTCTTCTTTGCAATGCTGCTGCTGGTGCCGCAGCTGGGTGTATTTCTGCGACGTTTGTATGTCCTTTAGATGTAATCAAAACTAGGTTACAGGTTCATGGGACTCCTGATGTTGCTAATGGAAATGTTAAAGGTAGTCTTATAGTTGGTAGTTTGGGACAAATATATCAGAAGGAGGGGTTGCGTGGCATGTACCGCGGGCTAGCTCCCACTGTTCTGGCGTTACTTCCAAACTGGGCTATCTATTTTACCATATACGAACAGCTCAAGCGGATGCTTTCTGATGATGAAAACCACCGTCTTTCAGTTGGAGCTAATATGGCAGCTGCTTCAGGTGCCGGAGCTGCAACTACTATAGTTACAAATCCATTCTGGGTTGTCAAAACTAGACTCCAAACCCAGGGAATGAGACCCGGTGTTGTGCCATATAGAAACACCCTATCTGCTTTGAAGAGAATAGCTCATGAGGAAGGCATTCGTGGGATGTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCaatatatgagaaaataaaatttcatttagCAAATCAAGATAACAAACCGGTGGATAAGCTCGGGGCACGTGATGTTGCAATTGCCTCATCAGTCTCCAAAATGTTTGCATCCACATTGACATATCCTCATGAGGTTGTTCGTTCCAGACTGCAAGAACAAGGACACCACTCAGAGAAGCGGTACTCTGGTGTGACAGACTGCATTAGAAAGGTATCTCAAGAAGGAGGACTTTCTGGTTTTTACCGCGGGTGTGGTACCAACCTCCTGAGGACAACCCCAGCTGCCGTAATCACATTCACCAGTTTTGAAATGATACAACGTTTTCTAGTTTCTCTGTCCCTTTCTGACCCACCGCCGCATAATTTGTAA 954 0.4476 MSNDHSHAPNLYAKGLLCNAAAGAAAGCISATFVCPLDVIKTRLQVHGTPDVANGNVKGSLIVGSLGQIYQKEGLRGMYRGLAPTVLALLPNWAIYFTIYEQLKRMLSDDENHRLSVGANMAAASGAGAATTIVTNPFWVVKTRLQTQGMRPGVVPYRNTLSALKRIAHEEGIRGMYSGLVPALAGISHVAIQFPIYEKIKFHLANQDNKPVDKLGARDVAIASSVSKMFASTLTYPHEVVRSRLQEQGHHSEKRYSGVTDCIRKVSQEGGLSGFYRGCGTNLLRTTPAAVITFTSFEMIQRFLVSLSLSDPPPHNL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03773 317 Gene3D Mitochondrial carrier domain 112 308 IPR023395 -
Tsu01g03773 317 Gene3D Mitochondrial carrier domain 2 111 IPR023395 -
Tsu01g03773 317 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 2 316 - -
Tsu01g03773 317 Coils Coil 316 317 - -
Tsu01g03773 317 Pfam Mitochondrial carrier protein 16 109 IPR018108 -
Tsu01g03773 317 Pfam Mitochondrial carrier protein 115 206 IPR018108 -
Tsu01g03773 317 Pfam Mitochondrial carrier protein 221 305 IPR018108 -
Tsu01g03773 317 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 2 316 IPR044712 GO:0006862|GO:0055085
Tsu01g03773 317 SUPERFAMILY Mitochondrial carrier 16 299 IPR023395 -
Tsu01g03773 317 PRINTS Mitochondrial carrier protein signature 130 148 IPR002067 GO:0055085
Tsu01g03773 317 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Tsu01g03773 317 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Tsu01g03773 317 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Tsu01g03773 317 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085
Tsu01g03773 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 106 IPR018108 -
Tsu01g03773 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 203 IPR018108 -
Tsu01g03773 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 303 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03773 Tsu-Chr1 45447374 45455624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03773 5 306 Chloroplast and Mitochondria Gene Families AT2G47490 74.503 4.01e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03773 K15115 - zju:107426265 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03773 01 45447374 45455624 Tsu01g03773 01 45447374 45455624 ECH