Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03739 ATGGCGTCGAGTCAACAACGTCCTGTAAGTTCAGGATCGGACGGCGGAGATTTACAAATTGACGAaaggaagagaaagagaatgTTATCTAACCGTGAATCTGCTCGACGATCGAGGATGAGAAAGCAGAAACAGATTGAAGATCTGACCGAAGAATCTGGTAGACTGCAAACCGAGAACGATCGTGTGGCGAAGAGGATTAAGGTGACGGAAGAAGCTTATGTTGAGATGGAAGCTGCAAATAATGTTATCAGAGCACAAACTATGGAATTGGAGGAACGATTGCGGTTTCTGAATTCGGTTATTGATGTTGCTGAAGATGTTAATGGTTTTTCTGTTGAAATGGCTATGATTCCTGATCCTCTTCTTAAGCCTTGGTTTATACCGAATTATTATTCAGAATCACATGATATGATGCTGCGTTGA 426 0.4014 MASSQQRPVSSGSDGGDLQIDERKRKRMLSNRESARRSRMRKQKQIEDLTEESGRLQTENDRVAKRIKVTEEAYVEMEAANNVIRAQTMELEERLRFLNSVIDVAEDVNGFSVEMAMIPDPLLKPWFIPNYYSESHDMMLR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03739 141 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Tsu01g03739 141 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Tsu01g03739 141 MobiDBLite consensus disorder prediction 17 57 - -
Tsu01g03739 141 MobiDBLite consensus disorder prediction 1 57 - -
Tsu01g03739 141 Pfam bZIP transcription factor 23 80 IPR004827 GO:0003700|GO:0006355
Tsu01g03739 141 CDD bZIP_plant_GBF1 24 74 IPR045314 GO:0003700|GO:0006355
Tsu01g03739 141 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Tsu01g03739 141 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 132 - -
Tsu01g03739 141 Gene3D - 21 77 - -
Tsu01g03739 141 Coils Coil 32 66 - -
Tsu01g03739 141 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 132 - -
Tsu01g03739 141 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03739 Tsu-Chr1 45113037 45114195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03739 21 129 bZIP Transcription Factor Family AT3G62420 50.459 7.47e-35 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g03739 bZIP_1 4.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03739 K25786 - gmx:780550 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03739 01 45113037 45114195 Tsu01g03739 01 45113037 45114195 ECH
Tsu07g04284 07 48293845 48295087 Tsu01g03739 01 45113037 45114195 PCT