Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03735 ATGGTGTCCAAACCTACCGATTCTCCTCTCCTACTTCATCAAACATTACATGAAGAGCCAGCAAATGATGTTGTTGGAACTTTAACCAACAAGATAAATCACTTGAAAAAGCAAATCCAGGAAGAGAGAATTGAATCCATTAGTGAAAAACTTCAGAGGAACCAGACGAAGCTACAATGCCATACTTCAGGAATAATGTCAGAAGTATCAACCAGGGACTCTTCACAGGCAGAGGAAAATCGGacatattcaattctttcttcaaGAATGGACCATCCTTTATGTCAATTCAATGGTCTTACCCAGGGTTCAGGAGACAGAAACCACAGCAATCAAGACATATCATCTGCTACAAGCATCAAGATTCCTCGTGTTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGGAATCAGAGAATGGCTGACGATCAGTCAGTTGTTGGAAGAAGACGGATCTATTATGATCAACGTGGAAGTGAAGCATTGATATGTAGTGACAGTGAAGAAGAATTAACAGAACCTGAGGGAGAAAAACATGAATTCTGTGAGGCTGAAGACCGTATTTTATGGATGGCATTTGAGGAACATGGGTTAAATGAGGAGGTATTGAATGTTGTTAGCAAGTATGTTGAGGGCACCAATGTAGAAATCCAGGAGCGGTACAAAAGTATCAGGGAAAATAATATTGGTAGGTTGGACCAGCAGCATTCGAAAAGCTCAGGAGAGCATGAATCTCCTATGAGCATGAATCTAGAGAAAAACCTGAGTGATGCATTAGATTCTCTTGATAACCTTTTCTGTCGCCGGTGCCTGATTTTTGACTGTCGACTGCATGGCTGTTCTCAACCTTTGACATATCCCAGTGAAAAGAAGACAGTTTGGTCTGAGCCTGAAGGTGATAGAAAACCATGTGGTGATCAGTGTTACCTTCAGTTAAAAGTTGTCAAAAGTTTGTCAAAAGATTCAACTCCCGGGTCTTTTCAGGATAAGAAAACTACAATTGTAGAGGAGGCAGATGGGATATTGGCACCATCCAGCTCAGGAGAACCTGATAATTTGGGGAAACGGAAGGTCACAAAACAGTCAGATACAGCACAATGTGACTCAAGATTGCCTCCTGATTCTCAGAATTCTTGTAAAAAGCTGAAGAGAATATCAGATGTAGTTACTTTAATTAGTGATAATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAATAAACATATAGATACTTGTGAAATTTTAGACAAATCTGTTGAACATACTTCAAATAAACCAATAGCTCCTTCTAGCACTTGCCATAATGAGAATGACAAAGGTGTTGTGGATGGATCAAAAGCTGTCACAAATGAGACAGAACTTAAAAATTCGTTGAGTTCAATGGAAGAACAAATTGATGGAATGCTTGGTTTCTCATATTGGAAACCTCTAGAGAAAGAGTTATACTTGAAGGGAGTGGAAATGTTTGGCAGAAACAGTTGCCTCATAGCTAGGAACTTACTTTCTGGTTTGAAGACTTGCATGGAAATATCTAGTTACATGCACGATGGAGGAGTGTCAATGCCGTACAGGTCTATTATTTCAGCTAGTTCGATCATGAATGACAGCGGAAAAATTGACACAGAATGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGAGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGTCACCCAACAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTACACTCCATGTGGCTGTCAATCAATGTGTGGAAAGGAATGTTCTTGTCTTAGCAACGGAACATGCTGTGAAAAATATTGTGGTTGTTCAAAAAGCTGCAAAAACCGGTTCCGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGTGAATGTGATCCAGATGTCTGTCGAAACTGTTGGGTTAGCTGTGGGGATGGTACATTGGGGGAGCCACCACGGCGTGGACAAAGTCAATGCGGAAATATGAGACTTCTTTTAAGGCAACAACAAAGGATTATCTTGGGGAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTAAAGAATCCTGTTAACAAAAATGACTACCTAGGAGAGTACACGGGCGAGCTGATCTCGCACAGAGAAGCTGATAAGCGTGGGAAAATATATGATCGAGCGAATTCGTCTTTTCTTTTCGATTTGAATGAGCAGTATGTTCTTGATGCTTATCGGAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAATCCCAATTGCTATGCAAAGGTGATTCTGGTTGCTGGAGATCATCGAGTTGGCATATTTGCCAAGGAACACATTGATGCCAGTGAGGAGCTCTTCTATGATTATTGTTATGGTCCAGATCAAGCTCCTCCATGGGCTCGTAAACCTGAGGGTTCAAAGAGAGATGAATCAGCAGTTCCACAAGGTAGAGCAAAGAAACACCAATCCCATTGA 2532 0.4088 MVSKPTDSPLLLHQTLHEEPANDVVGTLTNKINHLKKQIQEERIESISEKLQRNQTKLQCHTSGIMSEVSTRDSSQAEENRTYSILSSRMDHPLCQFNGLTQGSGDRNHSNQDISSATSIKIPRVERLPPYTSWIFLDRNQRMADDQSVVGRRRIYYDQRGSEALICSDSEEELTEPEGEKHEFCEAEDRILWMAFEEHGLNEEVLNVVSKYVEGTNVEIQERYKSIRENNIGRLDQQHSKSSGEHESPMSMNLEKNLSDALDSLDNLFCRRCLIFDCRLHGCSQPLTYPSEKKTVWSEPEGDRKPCGDQCYLQLKVVKSLSKDSTPGSFQDKKTTIVEEADGILAPSSSGEPDNLGKRKVTKQSDTAQCDSRLPPDSQNSCKKLKRISDVVTLISDNSKNLNLGACDENKHIDTCEILDKSVEHTSNKPIAPSSTCHNENDKGVVDGSKAVTNETELKNSLSSMEEQIDGMLGFSYWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHDGGVSMPYRSIISASSIMNDSGKIDTECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPTIWKRIADGKNQSCKQYTPCGCQSMCGKECSCLSNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPPRRGQSQCGNMRLLLRQQQRIILGKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVILVAGDHRVGIFAKEHIDASEELFYDYCYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03735 843 MobiDBLite consensus disorder prediction 820 836 - -
Tsu01g03735 843 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 843 IPR025778 GO:0031519
Tsu01g03735 843 ProSiteProfiles SET domain profile. 694 809 IPR001214 GO:0005515
Tsu01g03735 843 Pfam CXC domain 633 664 IPR041355 -
Tsu01g03735 843 CDD SET_EZH 694 810 - -
Tsu01g03735 843 MobiDBLite consensus disorder prediction 815 843 - -
Tsu01g03735 843 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 18 841 - -
Tsu01g03735 843 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 18 841 IPR045318 GO:0006338|GO:0018024
Tsu01g03735 843 SMART CXC_2 629 666 IPR033467 -
Tsu01g03735 843 Gene3D SET domain 595 810 IPR046341 -
Tsu01g03735 843 SMART set_7 694 815 IPR001214 GO:0005515
Tsu01g03735 843 Pfam SET domain 705 808 IPR001214 GO:0005515
Tsu01g03735 843 MobiDBLite consensus disorder prediction 341 378 - -
Tsu01g03735 843 MobiDBLite consensus disorder prediction 231 251 - -
Tsu01g03735 843 ProSiteProfiles CXC domain profile. 581 680 IPR026489 -
Tsu01g03735 843 Coils Coil 25 57 - -
Tsu01g03735 843 SUPERFAMILY SET domain 595 812 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03735 Tsu-Chr1 45083205 45092505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03735 683 812 C2H2 Transcription Factor Family AT2G23740 25.170 3.74e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu01g03735 SET 5.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03735 - - gmx:100808730 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03735 01 45083205 45092505 Tsu01g03735 01 45083205 45092505 ECH
Tsu07g04290 07 48330787 48336018 Tsu01g03735 01 45083205 45092505 PCT