Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03730 ATGACGATTGCTCTTGATGCTGCACGAGGACTTTCTTACCTGCATGAAGATTCACAGCCATGTGTCATACACAGAGATTTCAAGGCATCTAATATATTGCTTGAGAACAACTTTCATGCTAAAGTTTCTGATTTTGGTCTAGCTAAACTAGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGAGTCATGGGAACATTTGGGCTTGGGGGAAGGTATCAGAATGAAGATTTTGTTCGTGCTTGCACTATCGCTGCAGCCTGTGTTGCACCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGAAGCGCATCTCAGAAAATCATGATCCTGCATTACGGACATCCATTACAAGGCCTAACATGAGATAG 393 0.4377 MTIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVSDFGLAKLAPEGRANYLSTRVMGTFGLGGRYQNEDFVRACTIAAACVAPEASQRPTMGEVVQSLKMVKRISENHDPALRTSITRPNMR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03730 130 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03730 130 Pfam Protein kinase domain 3 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03730 130 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 69 130 - -
Tsu01g03730 130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Tsu01g03730 130 SUPERFAMILY Protein kinase-like (PK-like) 2 108 IPR011009 -
Tsu01g03730 130 PANTHER OS01G0750732 PROTEIN 1 68 - -
Tsu01g03730 130 PANTHER OS01G0750732 PROTEIN 69 130 - -
Tsu01g03730 130 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
Tsu01g03730 130 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03730 Tsu-Chr1 45043587 45044218 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03730 1 68 Receptor kinase-like Gene Family AT4G02010 88.235 2.90e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu01g03730 Pkinase 1.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03730 - - oeu:111405731 135.191