Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03729 ATGCCTTCACAAGATAAACCTTTCAAATCTTCATGGAAGCACGAGGACAAAATTTGGAGCAGAATTGAGTCACTTGAAGCATATGGAATTGATGCTTGTATAAATGGTGAACAAAAGTTGTTGCAAACAGAGGCTGCCCTCTATGGTGAAGAAGTCTTCCGATTAGGTGAAGAAAATGGTGTTAAGTCCCTTTCTGCACACGAGCTTTCTTTGACTTCACCGTCGCATCTGTCTGGTCATCCTGAGTTCTCTCACCTTGGCTGGGGGCACTGTGgacaagatgaaaagaaatttAGAGTGGAAGTTGAGGCTATTGGTCATTTGAGACACAAGTACTTCGTTAGACTTTTGGGTTTTTACTTTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGAAATTTACAGCAATGGCTTCACCGACCCATGCAATGGAAATCTTAG 453 0.4062 MPSQDKPFKSSWKHEDKIWSRIESLEAYGIDACINGEQKLLQTEAALYGEEVFRLGEENGVKSLSAHELSLTSPSHLSGHPEFSHLGWGHCGQDEKKFRVEVEAIGHLRHKYFVRLLGFYFEGTHRLLVYEYVNNGNLQQWLHRPMQWKS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03729 150 PANTHER RECEPTOR-LIKE KINASE PLANT 54 90 - -
Tsu01g03729 150 PANTHER RECEPTOR-LIKE KINASE PLANT 91 147 - -
Tsu01g03729 150 Pfam Protein tyrosine and serine/threonine kinase 93 145 IPR001245 GO:0004672|GO:0006468
Tsu01g03729 150 PANTHER OS01G0323000 PROTEIN 91 147 - -
Tsu01g03729 150 SUPERFAMILY Protein kinase-like (PK-like) 92 146 IPR011009 -
Tsu01g03729 150 PANTHER OS01G0323000 PROTEIN 54 90 - -
Tsu01g03729 150 Gene3D Transferase(Phosphotransferase) domain 1 84 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03729 Tsu-Chr1 45016435 45018264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03729 95 150 Receptor kinase-like Gene Family AT5G47850 43.333 1.95e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu01g03729 PK_Tyr_Ser-Thr 6.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03729 - - gmx:732653 121.324