Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03726 ATGCTTAGCCGGTTGCATCACCGTAACCTTGTAAAACTAGTTGGATACTATAGCAACCGTGACTCATCACAAAACCTCCTTTGCTATGAGCTTGTCTCAAATGGAAGTTTGGAGACCTGGCTTCATGGTCCCTTGGGAATAAATTGCCCTTTGGATTGGGACACCAGGATGACGATTGCTCTTGATTTTGCAAGAGGACTTTCTTACCTGCATGAAGATTCACAGCCATGTGTCATACACAGATTTCAAgCTAAACTAGCACCTGAAGGCAGAGCTAATTTACCTGTCTACTCGAGTCATGGGAACATTTGGGCTAGGCCAATTCTTAGAGATAAGGAGCGGTTAGAAGAACTTGCAGATCCAAGGCTTGGGGGAAGGTTTCCGAAGGAAGATTTTGTACGTGTTTGCACTATCGCTGCAGCCTGTGTTGCACCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGAGGCGCATCTCAGAAAATCATGATCCTGCATTACGGACATCCATTACAAGACCTAACATGAGATAG 555 0.4505 MLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVSNGSLETWLHGPLGINCPLDWDTRMTIALDFARGLSYLHEDSQPCVIHRFQAKLAPEGRANLPVYSSHGNIWARPILRDKERLEELADPRLGGRFPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVRRISENHDPALRTSITRPNMR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03726 184 SUPERFAMILY Protein kinase-like (PK-like) 1 161 IPR011009 -
Tsu01g03726 184 Gene3D Transferase(Phosphotransferase) domain 1 1 86 - -
Tsu01g03726 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03726 184 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 103 184 - -
Tsu01g03726 184 Pfam Protein tyrosine and serine/threonine kinase 1 81 IPR001245 GO:0004672|GO:0006468
Tsu01g03726 184 Gene3D Transferase(Phosphotransferase) domain 1 90 179 - -
Tsu01g03726 184 PANTHER OS01G0750732 PROTEIN 103 184 - -
Tsu01g03726 184 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 1 81 - -
Tsu01g03726 184 SMART tyrkin_6 1 160 IPR020635 GO:0004713|GO:0006468
Tsu01g03726 184 PANTHER OS01G0750732 PROTEIN 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03726 Tsu-Chr1 44995762 44997504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03726 1 184 Receptor kinase-like Gene Family AT4G02010 57.480 2.35e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu01g03726 PK_Tyr_Ser-Thr 4.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03726 - - gmx:100305437 294.664