Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03687 ATGGCTGAGCGTGCTGTTGGACAGGGATCATTTGGTGTAGTTTTCCAGGCAAAGTGCTTGGAGACAGGTGAAACCGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGATACAAGAACCGGGAATTGCAAACAATGCGCCTTCTAGACCACCCCAATGTTGTAACTTTGAAGCATTGTTTCTTTTCGACAACTGAAAAAGATGAGCTCTATCTTAACTTGGTACTTGAGTATGTTCCTGAGACTGTACATCGCGTGATCAGACACTACACCAAAATGAATCAGAGGATGCCATTGATATATGTAAAACTTTATTCTTATCAGATTTTGAGAGCACTAGCTTACATTCATAACTGTGTTGGAGTGTCTCATAGGGACATAAAACCTCAAAATTTACTGGTCAATCCTCACACTCACCAGTTGAAGATTTGTGACTTTGGGAGTGCAAAAGTTCTGgTCAAAGGTGAACCAAACATATCTTACATCTGTTCTAGGTATTATAGAGCTCCTGAGCTTATATTTGGTGCAACTGAGTACACCACATCCATTGACATTTGGTCAGCTGGTTGTGTACTTGGCGAACTATTGCTTGGCCAGCCTCTCTTTCCCGGTGCAAGTGGAGTAGATCAGCTTGTTGAGATTATCAAGGTTTTAGGTACGCCTACAAGGGAAGAAATAAAGTGTATGAATCCTAATTACACCGAATTCAAATTCCCACAAATCAAAGCTCATCCATGGCACAAGATCTTTCGCAAGCGTATGCCAGCAGAAGCTGTGGATCTCGTTTCAAGGCTACTGCAATACTCTCCAAATCTTCGATGCACTGCCTTGGAGGCCATGGTTCATCCATTCTTTGATGAATTGCGTGATCCAAACACCCGCTTACCTAATGGGCGTAATCTTCCTCCTTTATTTAACTTCAAAGCCAATGAACTTAAAGGAGTGCCTGCTGAAATGCTGGTGAAGCTGATTCCGTCTCACGCAAGAAAGCAAAGTGCCTTGTTTATGTCGTAG 1011 0.4233 MAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEYVPETVHRVIRHYTKMNQRMPLIYVKLYSYQILRALAYIHNCVGVSHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLGELLLGQPLFPGASGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFRKRMPAEAVDLVSRLLQYSPNLRCTALEAMVHPFFDELRDPNTRLPNGRNLPPLFNFKANELKGVPAEMLVKLIPSHARKQSALFMS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03687 336 ProSitePatterns Protein kinases ATP-binding region signature. 6 30 IPR017441 GO:0005524
Tsu01g03687 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tsu01g03687 336 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 334 - -
Tsu01g03687 336 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 334 - -
Tsu01g03687 336 Gene3D Transferase(Phosphotransferase) domain 1 80 328 - -
Tsu01g03687 336 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03687 336 Pfam Protein kinase domain 3 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03687 336 CDD STKc_GSK3 3 287 IPR039192 -
Tsu01g03687 336 SUPERFAMILY Protein kinase-like (PK-like) 4 308 IPR011009 -
Tsu01g03687 336 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03687 336 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03687 Tsu-Chr1 44591361 44594839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03687 4 291 MAP Kinase Gene Family AT4G01370 35.690 2.05e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Tsu01g03687 Pkinase 2.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03687 K00924 - gmx:100788046 655.595