Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03686 ATGTCTCAGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAgcttatataagaaaaaatgttataaaattctTCTTTGAAGACGTCAATTTCCCTCAAACATCCGAAGTTGATAACATATTTTTACAAGAGGTGGAGAATTCCCTCAGAAAGGCTTTTCTTTTGGCAGATTCAGCTTTGGCTGATGATTGCAGTGTGAACACTTCGTCAGGGACCACAGCTCTTACTGCTATGATATTTGGACGGCTTCTAATGGTAGCAAATGCTGGTGACTGTCGAGCAGTTCTCAGTCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCACCGACCTATTTATCCATCAGAACGGAGGCGGGTTGAAGAATTGGGTGGTTACGTAGAGGACGGTTATCTTAATGGCGTTTTATCAGTTACAAGAGCACTAGGGGACTGGGACATGAAGTTACCTAGGGGTACTCCCTCACCTTTGATTGCAGAGCCCGAGTTTCGCCAAATGGTTCTAACAGAGGACGACGAATTCCTCATCATTGGATGCGATGGCATCTGGGATGTGATGACAAGTCAGCACGCCGTTAGTCTTGTTCGTAAAGGTTTGAGGAGGCATGATGATCCAGAGAAGTGCGCCAGGGACCTAGTTATGGAGGCATTACGCCTCAACACATTCGACAATCTGACAGTGATCATTGTCTGTCTCTCTTCCCTTGACCATGGGGAGTCAGACTCATCACCACCTCCCCAGCGAAAATTGAGATGCTGTAGCCTCTCTGCGGAGGCTCTTTGTAGCTTGAGAAACCTGTTGGAAGGAAGTGCTAGCAACTGA 822 0.4574 MSQVFDGHGGPEAAAYIRKNVIKFFFEDVNFPQTSEVDNIFLQEVENSLRKAFLLADSALADDCSVNTSSGTTALTAMIFGRLLMVANAGDCRAVLSRKGEAIDMSQDHRPIYPSERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGTPSPLIAEPEFRQMVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCLSSLDHGESDSSPPPQRKLRCCSLSAEALCSLRNLLEGSASN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03686 273 Pfam Protein phosphatase 2C 2 224 IPR001932 -
Tsu01g03686 273 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 3 254 - -
Tsu01g03686 273 Gene3D - 1 238 IPR036457 -
Tsu01g03686 273 ProSiteProfiles PPM-type phosphatase domain profile. 1 232 IPR001932 -
Tsu01g03686 273 PANTHER PROTEIN PHOSPHATASE 2C 3 254 IPR015655 GO:0004722|GO:0006470
Tsu01g03686 273 CDD PP2Cc 4 232 IPR001932 -
Tsu01g03686 273 SUPERFAMILY PP2C-like 4 234 IPR036457 -
Tsu01g03686 273 SMART PP2C_4 1 230 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03686 Tsu-Chr1 44581080 44584530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03686 4 269 PP2C-type Phosphatase Gene Family AT3G62260 70.037 7.03e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03686 K14803 - gmx:100785388 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03686 01 44581080 44584530 Tsu01g03686 01 44581080 44584530 ECH