Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03683 ATGGTTAGACTGCATGCAATACTCTGTACCTTGCTTCTTTTTATTCTCTCAGTTTCAACACTGACATCATCAACATCTTTGGACTTTGGTTTCTATAAGACAACATGTCCATCTGCTGAGGCAATTGTCAGAAGAGCTGTAAACAAAGCCGTTTCACTCAACCCAGGCATCGCTGCTGGTTTGATTAGATTGCATTTTCATGATTGTTTTGTTAGGGGATGCGATGGTTCTGTATTATTAGACAATACACCTGGTCACCCTTCTGAGAAAGACCACCCTGCAAATAATCCAAGTTTACGCGGCTTTGAGGTCATCAATGAAGCTAAGGCGCAAATAGAAGCTGTGTGTCCTAAAACGGTATCATGTGCAGATATTCTTGCTTTTGCAGCTCGAGACAGTACTCGCAAAGTTAGTGGTGGCATATACTACTCAGTACCATCAGGACGCAGAGATGGTCGAATCTCTATCTCCGACGAAGTCACACAAAATCTACTGCCGCCAACTACCAAAGCAGAGAAACTTATCAGTCATTTTGGTATAAAAGGCTTGTCAGCAGATGAAATGGTTACACTTTCTGGAGCTCATTCTATTGGTGTCTCACATTGTTCTTCTTTCTCAAAACGATTATACTCTTTCAATGACACATTTTCTCAAGATCCATCTATGGACCCTAAGTTTGCTATGTTCTTGAAATCCAAGTGTCCACCACCACAACCTCAGTTACAGCAGGTACAAAGCATAGACCCAACGGTGGTGTTCGATGGTTCCACGCCTAATGATTTGGACAACAAGTACTATATGAGGTTGAAGAATCACCGCGGTTTATTAACTTCGGATCAAACTTTGTATGATAGTGACTTAACTAAGCAAATGGTGTTAAGAAATGCCAGACATGCTGCAATCTGGAGAGTGAAGTTTGCTAAGGCTATGGTGCAAATGGGTTCCATAGGTGTGTCGACAGGTTCCCAAGGTGAGATTAGGGAGCGTTGCAGCGTTGTTAATTCTTATTAA 1011 0.4194 MVRLHAILCTLLLFILSVSTLTSSTSLDFGFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRLHFHDCFVRGCDGSVLLDNTPGHPSEKDHPANNPSLRGFEVINEAKAQIEAVCPKTVSCADILAFAARDSTRKVSGGIYYSVPSGRRDGRISISDEVTQNLLPPTTKAEKLISHFGIKGLSADEMVTLSGAHSIGVSHCSSFSKRLYSFNDTFSQDPSMDPKFAMFLKSKCPPPQPQLQQVQSIDPTVVFDGSTPNDLDNKYYMRLKNHRGLLTSDQTLYDSDLTKQMVLRNARHAAIWRVKFAKAMVQMGSIGVSTGSQGEIRERCSVVNSY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03683 336 Gene3D - 30 334 - -
Tsu01g03683 336 Pfam Peroxidase 43 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 SUPERFAMILY Heme-dependent peroxidases 27 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 Gene3D Peroxidase, domain 2 165 313 - -
Tsu01g03683 336 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Tsu01g03683 336 ProSiteProfiles Plant heme peroxidase family profile. 26 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03683 336 CDD secretory_peroxidase 28 333 IPR033905 GO:0004601|GO:0042744
Tsu01g03683 336 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tsu01g03683 336 PANTHER PEROXIDASE 20 332 - -
Tsu01g03683 336 PANTHER PEROXIDASE 25-RELATED 20 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03683 Tsu-Chr1 44571090 44572106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03683 22 335 Peroxidase AT3G21770 44.479 8.27e-84 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03683 K00430 - gmx:100790188 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03683 01 44571090 44572106 Tsu01g03683 01 44571090 44572106 ECH