Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03659 ATGGGGCCACATTACTCACTTGTTTCTGGTTCTCTTCATGATATCAAAACGATGATGATTGATGCAAGAAAAAGTGTCATGGATAAACACTCACACGATATTACTCAAAGGGTTCTTCCTCAGTACCAAATATGGTCCTCCTTATATGGGGAGAGATTTCTATATTGGTACGGTATAGAACCAATGATTTGTATCTTTGATGTAGAATTGGTGAAGGagattttatcaaataaatttgGTTTCTATCCAAAACGCAAAGTAAGGCCTTCTACAGTAACACTTGTTGGAGAAGGGTTAATTCTTATGGATGGAGTGAAGTGGATTAGTCGCAGAAGGATACTCAATCCTGCTTTCTCCATGGATAAACTCAAGGTTATGATAAGTAGAATGGCAGCATGTACCATTTCCATGGTAGATGAGTGGAAAAGGAAAGCCATTGAAGCAAAGGACAAATCAAAGACAATAGAGATGGCTGAAGAATTTAAAGAGCTAACAGCAAATATAATCGCCCACACTTCCTTTGGTACCAGCTTTGCTCATGGAAGAGAAGCCTTTAAAGCACAAACAGAGCTTCAAATGCTTTGTGCAGCTTCAAGTTCTGACATTTTCATTCCTGGCACACAATATTTACCTACTAAGTCAAACTTAGAGATATGGAAGCTTGATAGGAAAATGAAGAAATCACTAAAATGCATTATTGAAAGTAGGTTGAATTCTCAATCAGATAATTTCTCTTATGGAGATGATCTACTAGGAATAATGATGGATACAAAGAATGATGGTCCTGATAAGTTGAAGATGAATGAAATTATGGAAGAATGCAAAACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAACTGGCTTGTTTGGACTGTGTTTTTGTTAAGTTTGCATAAGGATTGGCAAGACAAACTTAGACAAGAGATCTTCGAGATTTGTGGCATGGAAATTCCTGATGCAGATATGCTATCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAATGGTGAACATGGTGTTGCTGGAATCATTAAGGTTGTACTAAGTACAAAATATTGGGGTGAAGATGCAAATGAGTTCAATCCAATGAGATTCATAAATGGAGTTTCTAAGGCTGCAAATCACCCAAATGCTCTACTTGCATTTTCAGTAGGTCCAAGAAATTGCATTGGTCAGAATTTTGCTATGTTGGAAGCTAAGACAGTGATGAGTTTAATTCTTCAAAGGTTTTCTTGGTCTCTTTCTCCTGAATATCAACATGCACCTGTTAACAACCTCACTTTGCAGCCACAACATGGTCTTCCCATCATTATAAAACCATTGCAGTTTTAA 1488 0.3233 MGPHYSLVSGSLHDIKTMMIDARKSVMDKHSHDITQRVLPQYQIWSSLYGERFLYWYGIEPMICIFDVELVKEILSNKFGFYPKRKVRPSTVTLVGEGLILMDGVKWISRRRILNPAFSMDKLKVMISRMAACTISMVDEWKRKAIEAKDKSKTIEMAEEFKELTANIIAHTSFGTSFAHGREAFKAQTELQMLCAASSSDIFIPGTQYLPTKSNLEIWKLDRKMKKSLKCIIESRLNSQSDNFSYGDDLLGIMMDTKNDGPDKLKMNEIMEECKTFFFAGHETTSNWLVWTVFLLSLHKDWQDKLRQEIFEICGMEIPDADMLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGEHGVAGIIKVVLSTKYWGEDANEFNPMRFINGVSKAANHPNALLAFSVGPRNCIGQNFAMLEAKTVMSLILQRFSWSLSPEYQHAPVNNLTLQPQHGLPIIIKPLQF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03659 495 PANTHER P450, PUTATIVE-RELATED 396 489 - -
Tsu01g03659 495 PANTHER P450, PUTATIVE-RELATED 2 326 - -
Tsu01g03659 495 Pfam Cytochrome P450 400 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 Pfam Cytochrome P450 48 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 SUPERFAMILY Cytochrome P450 401 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 Coils Coil 324 326 - -
Tsu01g03659 495 SUPERFAMILY Cytochrome P450 35 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 Gene3D Cytochrome P450 10 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PANTHER CYTOCHROME P450 FAMILY MEMBER 396 489 - -
Tsu01g03659 495 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 326 - -
Tsu01g03659 495 Coils Coil 386 387 - -
Tsu01g03659 495 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03659 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Tsu01g03659 495 Gene3D Cytochrome P450 391 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03659 Tsu-Chr1 44364196 44371248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03659 2 326 Cytochrome P450 AT2G46950 52.744 1.05e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03659 K20660 - aprc:113872106 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03659 01 44364196 44371248 Tsu01g03659 01 44364196 44371248 ECH