Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03655 ATGGTGTTGCTGGAATCATTAAGGTTGTACTGTCCTGCAATAGAACTAGAAAGAATGGCTTCAAAAGACATGAAATTAGGAAATTTGATGATACCAAAAGGAACATGTATCAAAATCCCAATTACAATGATTCACAGAAGTACAAAATATTGGGGTGAAGATGCAAATGAGTTCAATCCAATGAGATTCATAAATGGAGTTTCTAAGGCTGCAAATCATCCAAATGCTCTACTTGCATTTTCAGTAGGTCCAAGAAATTGCATTGGTCAGAATTTTGCTATGTTGGAAGCTAAGACAGTGATGAGTTTAATTCTTCAAAGGTTTTCTTGGTCTCTTTCTCCTGAATATCAACATGCACCTGTTAACAACCTCACTTTGCAGCCACAACATGGTCTTCCCATTATTATAAAACCATTGGAGTTGTAA 426 0.3592 MVLLESLRLYCPAIELERMASKDMKLGNLMIPKGTCIKIPITMIHRSTKYWGEDANEFNPMRFINGVSKAANHPNALLAFSVGPRNCIGQNFAMLEAKTVMSLILQRFSWSLSPEYQHAPVNNLTLQPQHGLPIIIKPLEL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03655 141 PRINTS B-class P450 signature 87 98 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PRINTS B-class P450 signature 78 87 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PRINTS B-class P450 signature 18 45 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PANTHER P450, PUTATIVE-RELATED 1 136 - -
Tsu01g03655 141 Pfam Cytochrome P450 1 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 136 - -
Tsu01g03655 141 SUPERFAMILY Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PRINTS P450 superfamily signature 1 10 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03655 141 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03655 Tsu-Chr1 44331800 44332225 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03655 1 140 Cytochrome P450 AT2G46960 63.830 8.26e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03655 K20660 - aprc:113872106 234.958