Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03652 atgatGAAGTTGCTGATTTTGTTTGCAGCTCAATTTACATTCTTAGTTTCTGGGTTTATCTCCTCTGAATCTGACTCACTATTTTCTTTCTCACAAAATGATCTTGTTTCAGTTAATCAATTGCAACCTCTTATGGTTAATCTCACTCTCATTCATGGAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTTCAACTAGTTGGCTTATTCACCTGGAGGGAGGAGGATGGTGTAACACTATTAGAAACTGTGTTTACAGAAAAAAGACTCCTCGTGGTTCCTCAATGTACATGGAAAATCAAATACCATTCACAGGAATACTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGCGATGGAGCGTCTTTTAGTGGAGATAGTGAAAATGAGGCTGCGGGGCTTCAATTCCGTGGACAAAGAATATGGCTAGCTGCAATGGAGGAAATGATGTCTCAAGGAATGGAGAATGCAGAACAGGCCCTTCTCTCCGGATGCTCCGCGGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCAGACCTTGTTACCAAAACCTTCCAAAGTGAAGTGTTTTAGTGATGCAGGATTTTTTCTTGATGCACTTGATGTATCTGGAGGACGGTCACTGAGGGATCTGTTTGGAGGCGTTGTTCAGTTACAGGAAGTTCACAAAAATCTGCCAAAAAATTGTCTAAGCCAACTTGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGGTAGAACATGTTGAGACGCCACTGTTTCTACTCAACGCGGCTTATGATGTGTGGCAGGTACGATCGAGTTTAGCCCCGTCCACAGCTGATCCCCTTGGCTCTTGGAATGACTGCAAATCAAACCATGCAGAGTGtaactcatctcaaattcagttCCTCCAAGATTTCAGAAATCAAATGCTTGATGACGTGAAGGACTTCTCAAAGTCGTCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACGTGAGTTATGGTTCGCTGATAACTCTCCTCTTATCGATGAAAAGCCAATTGCAGTTGCAGTTGGAGACTGGTTTTTCGACCGAGAAGTTGTCAAAGCTATTGACTGTCCTTACCCTTGTGACAACAGCTGCCATAATCTGGTGTTTAAATGA 1230 0.4163 MMKLLILFAAQFTFLVSGFISSESDSLFSFSQNDLVSVNQLQPLMVNLTLIHGADSKGAVCLDGTLPGYHLDRGFGSGSTSWLIHLEGGGWCNTIRNCVYRKKTPRGSSMYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENEAAGLQFRGQRIWLAAMEEMMSQGMENAEQALLSGCSAGGLASIIHCDEFQTLLPKPSKVKCFSDAGFFLDALDVSGGRSLRDLFGGVVQLQEVHKNLPKNCLSQLDPTSCFFPQNLVEHVETPLFLLNAAYDVWQVRSSLAPSTADPLGSWNDCKSNHAECNSSQIQFLQDFRNQMLDDVKDFSKSSQTGLFINSCFAHCQSERRELWFADNSPLIDEKPIAVAVGDWFFDREVVKAIDCPYPCDNSCHNLVFK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03652 409 Pfam Pectinacetylesterase 42 389 IPR004963 GO:0016787
Tsu01g03652 409 PANTHER NOTUM-RELATED 2 408 IPR004963 GO:0016787
Tsu01g03652 409 PANTHER PECTIN ACETYLESTERASE 2 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03652 Tsu-Chr1 44295676 44299613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03652 1 409 Carbohydrate Esterase AT1G57590 63.636 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03652 K19882 - gmx:100786972 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03652 01 44295676 44299613 Tsu01g03623 01 44047981 44052222 ECH
Tsu01g03652 01 44295676 44299613 Tsu07g04368 07 48953254 48956694 ECH
Tsu01g03652 01 44295676 44299613 Tsu01g03652 01 44295676 44299613 ECH