Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03645 ATGGGTAACGGCACGTCTCGTGTTGTTGGTTGTTTAGCGCCATTCAATGGCAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGACGAAGGTTTAGGCCATTCCTTTTGTTATGTCAGACCGACTATGTTTGAATCTCCGGCTATTAGTCCGTCGAATTCTGAGAGGTTTACGGTTGATTCAAGTACTCTTGATTCTGAAACCTTGAGTGGTTCTTTTAGGCATGATAGCATGGAGCATTCTAATTCTTCCGGTTTGCATAAGCAGGGTAAGAATTTCCCTGAAACCACGTTCAAAACCATTTCGGGGGCTTCTGTGAGTGCTAATGTTTCCACAGCTAGGACTGGTGGTAACCAGAGTGCAATGTTTGCTGGTGATTTCTTGGAACCTGCTGCATCGTTTGAAGGAACTGCTTCATTTGCTGCGATTCCTTTGCAGCCGGTTCCTCGTGGTTCTGGACCTTTGAATGGTTTTATGTCTGGTCCTTTGGAGAGAGGTTATGCCTCGGGTCCGTTGGATAGAAGTGGTGGTTTCATGTCTGGGCCAATAGAGAAAGGAGTTATGTCAGGTCCTCTTGATGATACTGATAAATCCAACTTTTCAGCTCCGCTTGCGCGTGGTCGCCGGAGACCACGTCTACAAAATCTCATGAGAAGTGTTAGTGGACCGATGAAGAACACCTTTTCTCGAACGTTCTCTAAGCATTCCATGGGGGGAAGTTGGATGCAAAGGTTGTTTGTGCAACCGGTTACTCAATTGGCATGGCATTCCAGAGATGCAAAGTGTAGACCGGAAGTCTCTAGGAACTGTGGTATTGATGTTGGACCATATGAAACTGAGTATAAACACACACATAATTTGCAGTGGGCTCAGGGAAAGGCTGGTGAGGATAGGGTTCACGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCGCCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATCCACTTAAACCTGAAGTCCCTGAAACTGTAAAAGCCACCACTGCTCCAGAATGCAGTGGGCCAGAAATGTCTGATACTTGTACTAATTCTAATCAAGAATGTTTTGAAGCTTCTTCTGGTCCTGAGTTAATCAAGGATCAATCATATAACAGTGAAATTGTTGAGATGAATGCTGAAGTTAATGTAAATGTTGAAAACCAGTTATCTAATTGCGTAAGTAACTCGTCAACTGTTTCCAATTCGGTTCAACATGGACAGTTGACTGGAAAAGGTAGAAAAAGTATGAGGCTTTATGAGTTACTTCAGATGGAATCATGGGATGAACAAGGTTTTTTGTCAGACTCTGCACAATGTAAAGATTCAGTTCCGAATGAGTCAAAACTAGATGGGCATACAAGACCTTACTCGTTTAGTTTAAGAGAAGATGGATCTAGACATCAGGATGAAGTACCGTCTACATCAGGCGAAAATGGAGGCACTAGGTTTGATTCAACCAACCAGGAGCATGAGACTGTTTTTTCTGTTTCTGAATCAAGGCAGAATTCAAAGAAGTCGTTTATCGgtgcaaaaattaaaaaaatgtacaggAAGCCAAAGGCCTTGTGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCATAGGGAGGTAATTAGTGTTGACGAGAAAATAATAGAAGCATCAGGACCTATTAGAAAATGCAGGTCTGGAGTAGATCATAACGCAGTTTTAACAGCAATGGCTCGGGCTCTTGAAAGAACAGAAGAGGCATACATGGAAATGGCGGAGGATAATCTGAACAAAAATCCAGAACAAGCTATAATGGGATCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGATCAAACGATCGTCATCCTAATTCAAGTTCTGTCAAGGATGACATGAGGCATAGAAATAGATCTAGAGAGTTATTAGTGCGCATGGAGCTTGATAGGATTTCAGAGGAGTCCCCAATTCACAACCATAACAATCATGTTATCAAGATGAACAAAAACCGCGAGATATCCTTTTGCAAATTAAAAATGAGGGCTCTGCAGCTTTCTACAGATCACAGCACCAGTATTGAAGAGGAAGTTTTCAGAATAAGAGCTGAACACCCTGATGATAGTCAAGCCATATTGAATGATCGAGTAAAAGGACATTTAAAAGTTACCAGAGCATTTGGTGCTGGGTTCTTGAAGAGGccATCTTTTAATGACGCTCTACTCGAGGTGTTTCAAATTAACTATATTGGCTCTGCTCCCTACCTAAGTTGCACTCCTTCTGTTCTTCACCACCGACTTTCCTCAAGTGATCGATTCTTGGTACTCTCCTCAGATGGGCTTTACCAGTATTTTAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGTGATCCCGCACAGTACCTTATTGCAGAGCTTCTCTTTTGTGCTGCTAAAAAAAATGGAATGGACTTCCATGAATTGCTTGATATTCCTCATGGAGATCGACGGAAATATCATGATGATGTATCTGTCATGGTTGTTTCTTTGGAGGGAAGGATTTGGAGATCATCAGGataa 2697 0.4134 MGNGTSRVVGCLAPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTMFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEHSNSSGLHKQGKNFPETTFKTISGASVSANVSTARTGGNQSAMFAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGYASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQNLMRSVSGPMKNTFSRTFSKHSMGGSWMQRLFVQPVTQLAWHSRDAKCRPEVSRNCGIDVGPYETEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDPLKPEVPETVKATTAPECSGPEMSDTCTNSNQECFEASSGPELIKDQSYNSEIVEMNAEVNVNVENQLSNCVSNSSTVSNSVQHGQLTGKGRKSMRLYELLQMESWDEQGFLSDSAQCKDSVPNESKLDGHTRPYSFSLREDGSRHQDEVPSTSGENGGTRFDSTNQEHETVFSVSESRQNSKKSFIGAKIKKMYRKPKALCKKLFPWSYDWHREVISVDEKIIEASGPIRKCRSGVDHNAVLTAMARALERTEEAYMEMAEDNLNKNPEQAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSSSVKDDMRHRNRSRELLVRMELDRISEESPIHNHNNHVIKMNKNREISFCKLKMRALQLSTDHSTSIEEEVFRIRAEHPDDSQAILNDRVKGHLKVTRAFGAGFLKRPSFNDALLEVFQINYIGSAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03645 898 MobiDBLite consensus disorder prediction 503 517 - -
Tsu01g03645 898 CDD PP2Cc 595 889 IPR001932 -
Tsu01g03645 898 Pfam Protein phosphatase 2C 607 659 IPR001932 -
Tsu01g03645 898 Pfam Protein phosphatase 2C 721 837 IPR001932 -
Tsu01g03645 898 MobiDBLite consensus disorder prediction 487 502 - -
Tsu01g03645 898 SUPERFAMILY PP2C-like 293 890 IPR036457 -
Tsu01g03645 898 MobiDBLite consensus disorder prediction 469 517 - -
Tsu01g03645 898 PANTHER PROTEIN PHOSPHATASE 2C 11 898 IPR015655 GO:0004722|GO:0006470
Tsu01g03645 898 Gene3D - 267 438 IPR036457 -
Tsu01g03645 898 Gene3D - 508 895 IPR036457 -
Tsu01g03645 898 MobiDBLite consensus disorder prediction 655 674 - -
Tsu01g03645 898 PANTHER PROTEIN PHOSPHATASE 2C 32 11 898 - -
Tsu01g03645 898 MobiDBLite consensus disorder prediction 69 95 - -
Tsu01g03645 898 ProSiteProfiles PPM-type phosphatase domain profile. 281 889 IPR001932 -
Tsu01g03645 898 SMART PP2C_4 281 887 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03645 Tsu-Chr1 44236450 44241788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03645 1 898 PP2C-type Phosphatase Gene Family AT2G46920 62.237 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03645 - - cam:101510249 1585.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03645 01 44236450 44241788 Tsu01g03645 01 44236450 44241788 ECH