Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03626 ATGGGACCTGATGACAGTGATGAACCAACTTTTGATACCACACAAGATGCTCCTATAACACAAACAGATCAAGTAATCCCTATGGATTGTGATGAAAAAATAAAGCCTAAAGTAGGACAATTGTTTGATACATTAGAAGATGCTGAAAGTTTTTACAAAAACTATGCACACAGTGTTGGCTTTAGCGTGCGTTGCTCgtcagaaaataaaaatcaaaatggtGTCAAGCGTTGGAAATATTTTGTTTGCTCAAAGGAAGGTTACAAACCAAATGAAGCAAAAGATGGCGAAGGAGAACAAACTCAAACAGTAATTAAAACTAAGAGGAGGAGTCTTACTGGAGAAGGATGTGATGCCAAAGTTGCTTTTAAACTTGTAGAGGGAGGTAAATATGAGCTCACTAAATTTCATGAAAGCCATACACATGCACTTGCCTCACCTAGCAAGAGACCGTTTCTCAGATCAGCGAGAAAAGTGAATCCTGTTCATAAGAGTATAATGTATTCAAATTGTAAAGTAAATATTGGTGTTTCAAAAACATACCAATTATTGTCCGAACAACTTGGTGGTTATCAAAATGTTGGGTGCACACAGAGGGATCTACAAAATTGTTTGAGAGATTTAAAGACCGTGACTAAAGATTCTGATGCAAATGTATTTATTGATAACTTCAAGCGAAAGAACGAAGTGAACCCATCATTTTATTTTGCATATGAGGTAGATGTTGAAGATCAACTGAAATATGTTTTCTGGGCAGATGGTATATGTAGAAAAAATTATTCGTTATTTGGTGATGTGGTTTCGTTTGACACtacatataaaacaaataaatattcaatGATTTTTGCCCCATTTACTGGAGTAAACCACCACAGACAATGTATCACCTTTGGAGCTGCCTTCTTAGCAGAAGAGAAAGCCGAGTCATTCATTTGGTTATTTGAAAAGTTTTTGGAAGCAATGGGAGGAAATCCGCCAAATCTTCTAATAACAGATCAAGATCCAGCCATGAAAGTTGCCATAGAGAAGGTATTTTCTTCCTCTTCACTTTGCATGTGGCACATTATGAAAAAGGTTTCTGAAAAGGTGGGTGTTTCTTTAAATGGTAATTCAGAGTTCAATAATAAATTCAAGTCATGTGTTTGGGGCTCAGAGACTCCCAACGAATTCGAAGCAACATGGAAATCTATCATGATTGAGTTTGAGTTGGAAAAGAATGAATGA 1224 0.3538 MGPDDSDEPTFDTTQDAPITQTDQVIPMDCDEKIKPKVGQLFDTLEDAESFYKNYAHSVGFSVRCSSENKNQNGVKRWKYFVCSKEGYKPNEAKDGEGEQTQTVIKTKRRSLTGEGCDAKVAFKLVEGGKYELTKFHESHTHALASPSKRPFLRSARKVNPVHKSIMYSNCKVNIGVSKTYQLLSEQLGGYQNVGCTQRDLQNCLRDLKTVTKDSDANVFIDNFKRKNEVNPSFYFAYEVDVEDQLKYVFWADGICRKNYSLFGDVVSFDTTYKTNKYSMIFAPFTGVNHHRQCITFGAAFLAEEKAESFIWLFEKFLEAMGGNPPNLLITDQDPAMKVAIEKVFSSSSLCMWHIMKKVSEKVGVSLNGNSEFNNKFKSCVWGSETPNEFEATWKSIMIEFELEKNE 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03626 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 203 406 - -
Tsu01g03626 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 27 164 - -
Tsu01g03626 407 Pfam FAR1 DNA-binding domain 50 145 IPR004330 -
Tsu01g03626 407 Pfam MULE transposase domain 266 358 IPR018289 -
Tsu01g03626 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 203 406 IPR031052 GO:0006355
Tsu01g03626 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 164 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03626 Tsu-Chr1 44080631 44081854 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g03626 FAR1 5.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03626 - - cqi:110709295 447.203