Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03623 ATGGTGAACCTTTCCTGGGTTTGCATTGTAATAGGACTTGTTTATGTTGATGCTTATCACATCAATGAAACTGAACTCTCTATTTTAGAAGCTCATGAAGCTTCTTTTTCATTTGCTGTGAATCAGCCTCATATGGTTGGAATCACCTTTATTCAATCTGCTGCTGCTAAAGGAGCTgTCTGCTTGGACGGAACATTGCCTGCTTATCATTTTGATCGCGGATATGGATCGGGTGCAAACAGCTGGCTCGTTAATTTAGAGGGAGGTGGATGGTGTAATAATGTTAGATCATGCGTCTATCGCAAGACAACACGGCGTGGGTCATCAAAATATATGGAAAAATCGTTACCTTTTACGGGAATATTAAGCAATAGTCCTCAAGAGAATCCAGATTTTTTTAACTGGAATAGAGTGAAAATTCGCTACTGTGATGGTGCCTCTTTTACCGGGGATAGCGAAGATAGGGCAGCACAACTGCAATTCCGAGGACAACGCATTTGGTTGGCTGCAATTGAGGATTTGATGTCAAAAGGAATGCGCTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCCGGTGGTTTGGCTACTATTTTACACTGCGATGAATTTCGAGGTCTATTCCCAGGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGTTTATTTCTTAATGCTGTCGATGTAGCAGGTGGACATACCCTCAGGAATTTTTTCAACGGTGTTGTAACACTACAGGGAGCGCAGAAGAATCTTCCACGGAGTTGTACTAATCATCTTGATCCCACTTCGTGCTTCTTTCCCGAGAACTTGATTGCCAGTATCAAAACTCCGCTATTCATTCTTAATACTGCCTATGATTCATGGCagATCCAATCAAGCTTAGCTCCTCCATCGGATGATCCTCACGGCTATTGGCACGATTGCAGATTAAACCATGCTAAATGTACTGGTCCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGCTGAATGTTGTTAGAGGCTTCTCAAGATCAAATCAAAATGGATTGTTCATAAATTCATGCTTTGCTCACTGCCAATCTGAAAGGCAAGACACATGGTTTGCTGACAACTCTCCTGTCATAGGAAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTTAACCGAGCCGTTTGTAAGGACATTGATTGTCCTTACCCTTGTGATAACACATGCCACCATCTAGTTTTCAGATGA 1230 0.4244 MVNLSWVCIVIGLVYVDAYHINETELSILEAHEASFSFAVNQPHMVGITFIQSAAAKGAVCLDGTLPAYHFDRGYGSGANSWLVNLEGGGWCNNVRSCVYRKTTRRGSSKYMEKSLPFTGILSNSPQENPDFFNWNRVKIRYCDGASFTGDSEDRAAQLQFRGQRIWLAAIEDLMSKGMRFAKQALLSGCSAGGLATILHCDEFRGLFPGTTKVKCLSDAGLFLNAVDVAGGHTLRNFFNGVVTLQGAQKNLPRSCTNHLDPTSCFFPENLIASIKTPLFILNTAYDSWQIQSSLAPPSDDPHGYWHDCRLNHAKCTGPQIQFLQGFRNHMLNVVRGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFNRAVCKDIDCPYPCDNTCHHLVFR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03623 409 PANTHER NOTUM-RELATED 5 408 IPR004963 GO:0016787
Tsu01g03623 409 Pfam Pectinacetylesterase 41 388 IPR004963 GO:0016787
Tsu01g03623 409 PANTHER PECTIN ACETYLESTERASE 5 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03623 Tsu-Chr1 44047981 44052222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03623 1 409 Carbohydrate Esterase AT1G57590 65.385 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03623 K19882 - gmx:100782401 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03623 01 44047981 44052222 Tsu07g04368 07 48953254 48956694 ECH
Tsu01g03652 01 44295676 44299613 Tsu01g03623 01 44047981 44052222 ECH
Tsu04g04410 04 51937706 51941397 Tsu01g03623 01 44047981 44052222 ECH
Tsu01g03623 01 44047981 44052222 Tsu01g03623 01 44047981 44052222 ECH
Tsu07g04368 07 48953254 48956694 Tsu01g03623 01 44047981 44052222 PCT