Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g03592 | ATGCCAATAAGAAAGTATTACTGCGAATACTGCGAAAAACAATTTCAAGACACTCCGTCGGATCGGAAACGCCACTCTGCCGGCATTCAACACCAGCAAGCCAAAGCTCGTTGGTACGATTCCTTCAAaccccaacaacaacaacaacacaacaacaaccCTAATCAACCCTTCTGCCTCCACTTCGTCAACACGGGATTTTGTCGTTATGCCGATTCTTGCAAATATTTTCATCCCAATTCCAACAATATACAGCAGCAGCAACCAATAATAAACAACACCACACCAGGAGGGGATGTAGTTGTAGAAAGTATGGGAGTGTCGTTGGGCAATTTACCTCCTTCGCTCCAGCCTCCGCCTGAGGGTGGATACCCCCAATTTCCCTTTGTTGACTGGGGATAG | 402 | 0.4303 | MPIRKYYCEYCEKQFQDTPSDRKRHSAGIQHQQAKARWYDSFKPQQQQQHNNNPNQPFCLHFVNTGFCRYADSCKYFHPNSNNIQQQQPIINNTTPGGDVVVESMGVSLGNLPPSLQPPPEGGYPQFPFVDWG | 133 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g03592 | 133 | Pfam | U1 zinc finger | 4 | 39 | IPR013085 | GO:0008270 | |
Tsu01g03592 | 133 | SUPERFAMILY | beta-beta-alpha zinc fingers | 4 | 57 | IPR036236 | - | |
Tsu01g03592 | 133 | ProSiteProfiles | Zinc finger C3H1-type profile. | 53 | 81 | IPR000571 | GO:0046872 | |
Tsu01g03592 | 133 | SUPERFAMILY | CCCH zinc finger | 55 | 81 | IPR036855 | GO:0046872 | |
Tsu01g03592 | 133 | Gene3D | Classic Zinc Finger | 3 | 56 | - | - | |
Tsu01g03592 | 133 | PANTHER | NUCLEASE-RELATED | 1 | 133 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Tsu01g03592 | zf-U1 | 1.4e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g03592 | K13152 | - | gmx:100527203 | 182.57 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu01g03592 | 01 | 43809954 | 43810568 | Tsu01g03592 | 01 | 43809954 | 43810568 | ECH |