Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03581 ATGGCACCCAAATCCACAACACGCGCCTCCTCCGAAGCTTCTGAATTCTTCAAACCTGGAACCTTAGTCGAAGTCAGCTCCGACGACGACGGATTCCGCGGTTCTTGGTTCACCGGCAAGATCCTCCGTCGTGTCTCCGCCGACAAATTCATGGTCGAGTATGACACCTTAATGGAAGACGATAAAGGCAAAAAACATTTGAAAGAATCCCTTAAACGTCACCAGCTCCGTCCAATTCTTCCGACGGAGACTAACCGTGAATTCAAATTCGGCGATGAAGTTGATGCGTATCATAATGATGGTTGGTGGGAGGGTTACATTACCGAGGAATTGAAAGATGGAAGATTCGCTGTTTATTTCAGAGTCTCAAGAGAGCAGATCGTGTTCACCAAGGAGGAGCTCCGACTTCACCGTGAATGGATTGATGAAAAATGGGTTCCACCATTTCAACAACAGGATggtaatgataatgataatgctAATGCTAATGAAACTGAGAAGAAAATTAAGCGTGTGAAGGCTGCTGAAACTGTGACAGTAGAGAAAGATGATTTTAAGTTTAAGGAAGGGGCATTGGTTGAGGTTTGTAGCGACGAAGATGGTTTTAAAGGGGCTTGGTTTTGTGCTACTATTGTTGAGTTAAAGGGAAAATCTAAGTTTGTTGTTGAGTATGATAGCTTGCTTGATGATGATTCAAAACTGTTGAGAGAGGAGATTAGTATCTTGCATGTTAGGCCTCGTCCTCCGATAACTGCTGATGTTGCTGAGTTCAAGTTTCTTGATGAAGTTGATGCTTTTCACAATGACGGTTGGTGGGTTGGTCTTGTTGCGAAAGTTCTTGGGGACTCGAAGTATATTGTTTATTTCAGGAACTCTAATGAAGAGCTGGAGTTTCAGCATTCTCAGTTGAGGCTACATCAGGATTGGATGGATGGCAAATGGGTCATGGCTTCTAAGGCGGTGAAAGTTTGA 972 0.43 MAPKSTTRASSEASEFFKPGTLVEVSSDDDGFRGSWFTGKILRRVSADKFMVEYDTLMEDDKGKKHLKESLKRHQLRPILPTETNREFKFGDEVDAYHNDGWWEGYITEELKDGRFAVYFRVSREQIVFTKEELRLHREWIDEKWVPPFQQQDGNDNDNANANETEKKIKRVKAAETVTVEKDDFKFKEGALVEVCSDEDGFKGAWFCATIVELKGKSKFVVEYDSLLDDDSKLLREEISILHVRPRPPITADVAEFKFLDEVDAFHNDGWWVGLVAKVLGDSKYIVYFRNSNEELEFQHSQLRLHQDWMDGKWVMASKAVKV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03581 323 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 11 318 - -
Tsu01g03581 323 Gene3D - 176 257 - -
Tsu01g03581 323 Coils Coil 155 175 - -
Tsu01g03581 323 Pfam Agenet domain 20 81 IPR008395 -
Tsu01g03581 323 Pfam Agenet domain 190 249 IPR008395 -
Tsu01g03581 323 Pfam Agenet domain 91 149 IPR008395 -
Tsu01g03581 323 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 11 318 - -
Tsu01g03581 323 SMART agenet_At_2 185 254 IPR014002 -
Tsu01g03581 323 SMART agenet_At_2 15 84 IPR014002 -
Tsu01g03581 323 SMART agenet_At_2 255 311 IPR014002 -
Tsu01g03581 323 SMART agenet_At_2 86 142 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03581 Tsu-Chr1 43734713 43738090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03581 197 309 PHD Transcription Factor Family AT5G58610 30.370 8.07e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03581 - - aprc:113871596 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03581 01 43734713 43738090 Tsu01g03581 01 43734713 43738090 ECH