Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03579 ATGTCCGATGACAAATCCGCCACAGACCAATACGGCGTCCTCCTCTACTACAACTACGTCGATATTCCAAACCTCAACGACCTCCTCACATTCTACCGCTCCAATTGCTCCTCCCTCTCCCTCCTCGGCCGTGTTCGCCTCTCTTCCCACGGCGTCAATGTCACCGTTGGTGGCAATTTATCCTCTTTGGAACGACACATTGAAGACCTCAAAGCTAATAGTAATTTATTTCATGGAACTGATTTCAAACTTGCAACTTGTCATCAACCGTTAAACGACGAAGTTGCTAAGGAGTGTGGATTCACTTCACTCTCAATTCGAATTGTCAAGGAACTTGTTACTCTGAGTTCTCATCCACTATTGAAGTCACCAGAAATTTCCAATGCTGGAAGACATTTATCAGCACTTGAGTTTCATTCAACCCTTCACAATGCTAATAAGGAGAGTCCAGAAAACAATCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGGATTGGGAAGTTTCATGCACCAAATGTTGAAACTTTGGATCCGCAGGTTAGGCAGTACAGTGATTTCTCCTCGTGGATAGATGATAGAGGCGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGCGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAAGgaaagaattttgtttttgatcaCCGGATATCAGTTGGAGGTTCAGATGCTAGTACAATTGGTACCTGTCTTATATGTCAATGTTCCTTTGACGATTACTCTTCACGCTGTCGATGTACTTATTGCAGAATGCTTGTCTTGGTTTGCCATAGTTGCCAGAATGAATCTGCGCAGTACGTTTGTGAGCTATGCCAAAAACAGGGTAAGGCTGTTGGGTCAAAGCAGTTAATTGAAAATGATGAATCAAAAAAATCTCTGGCAGATGTTGAGTTCCTGAATTTATCTTCCGATACTGTGCTCTTGCCTCGGGCGCCTAGAGGGGATGATGTAAGCACCTCAAGAAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCTTCTAGTTTTAAGGGAAGAACTGCATCGTTAGCCAAAAAACTCAAGAAAATTGCTGAATTTGTTTTTATAGACGCACCTCATGAAGTGCCCTTCATTTATCACACACCAGTGCCAGTGCCCCATGTGGATGGTTCATCGCCCTCTTTGCCAGCTAGTCCACCTCCACCTTTGGAGAATTGCAAAAAGAAGTTCGCATGGTTTACAGCACCCGATTTTGATGGAAGTAGTGGTGTTGAGTGGAAGGTAGCCAACGGCCCATTTGATCCACTTCAATACCAGCAACAAACTGGTGGATGCGATATTTCAATATCACACTTAGAGAACGTGTTCTCCCAAGAAGGGCCATTTGATGGAATCTTGGGATTCTCTCAGGGAGCAGCAATGACTGCTGTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAGATTTGTAGTCTTGTGCTCAGGCTTTGCTCTGCATTTGAAGGAGATGGAGTGTAGCCCTATCAAGTGTCCTTCTCTTCATATTTTTGGTAATGAACATGGTCAAGACAGACAGATAGCCAACCAAACAAGCAAGGAACTTGCTTCTCTATATGACAGTGGTTGTTCTGTGATTGTTGAACATGACTGTGGTCATATAATTCCTACTCGGTCCCCATATATTGATGAGATCAAGGCTTTCCTTGGGCGATTTCTGTAA 1833 0.4261 MSDDKSATDQYGVLLYYNYVDIPNLNDLLTFYRSNCSSLSLLGRVRLSSHGVNVTVGGNLSSLERHIEDLKANSNLFHGTDFKLATCHQPLNDEVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSALEFHSTLHNANKESPENNLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDRGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGYFKGKNFVFDHRISVGGSDASTIGTCLICQCSFDDYSSRCRCTYCRMLVLVCHSCQNESAQYVCELCQKQGKAVGSKQLIENDESKKSLADVEFLNLSSDTVLLPRAPRGDDVSTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKIAEFVFIDAPHEVPFIYHTPVPVPHVDGSSPSLPASPPPPLENCKKKFAWFTAPDFDGSSGVEWKVANGPFDPLQYQQQTGGCDISISHLENVFSQEGPFDGILGFSQGAAMTAVISAQQEKLKGKMDFRFVVLCSGFALHLKEMECSPIKCPSLHIFGNEHGQDRQIANQTSKELASLYDSGCSVIVEHDCGHIIPTRSPYIDEIKAFLGRFL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03579 610 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 609 IPR020936 -
Tsu01g03579 610 SMART rhod_4 140 247 IPR001763 -
Tsu01g03579 610 Gene3D - 1 113 - -
Tsu01g03579 610 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 609 - -
Tsu01g03579 610 Gene3D alpha/beta hydrolase 363 610 IPR029058 -
Tsu01g03579 610 Gene3D - 122 277 IPR036873 -
Tsu01g03579 610 SUPERFAMILY alpha/beta-Hydrolases 364 610 IPR029058 -
Tsu01g03579 610 Pfam Rhodanase C-terminal 252 317 IPR022111 -
Tsu01g03579 610 ProSiteProfiles Rhodanese domain profile. 150 250 IPR001763 -
Tsu01g03579 610 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 120 264 IPR036873 -
Tsu01g03579 610 Pfam UPF0176 acylphosphatase like domain 12 111 IPR040503 -
Tsu01g03579 610 Pfam Serine hydrolase (FSH1) 366 601 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03579 Tsu-Chr1 43715291 43720255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03579 9 610 Sulfurtransferasese or Rhodanese AT1G09280 62.871 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03579 - - mtr:MTR_1g084180 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03579 01 43715291 43720255 Tsu01g03579 01 43715291 43720255 ECH