Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03576 ATGGATCATTCATCTCATTCACACACCTTTCAAGAATCCAATCACAAAAAACGCCGTAAAATCGGAGACCTAAACACCGATCAAAATTCCCTAAATCTCATGCCATGGAGATCCGAATCAGACCAAAACACCTACTCCAAAAAACTCATCGAAGCTCTCCGTCAGATAAATTCACcggaaacaacaacaaccaaaccTAGAATCGCCGGTCAAGTCCGTGAAACCGCCGATCGAGTTCTCGCATCAACTGCTAAAGGAAGAACACGCTGGAGCCGCGCGATTCTTGGAAAGTGGAAGAAACTTCGTAGACATCACAGGAAAGTGAAGAAAACTGCTAGTGGATTGAATAGAGCAGGGATTGAGAAAGAGAGGATCCGACGGTTACCGGCGGTGCAGAAGAAAACTCGTGTTCTAGGCCGGTTGGTTCCTGGTTGCCGGAAAGTTCCTTTACCGAATCTTCTAGAAGAAGCTACTGATTATATTTCTGCTTTGGAGATGCAAGTGCGTGCTATGACTGCTCTTGCTGAGCTTCTCGCCGGTGGTACATCGGCGGGGATTGCCGGTCAGGTGTTGAGTTGA 579 0.4542 MDHSSHSHTFQESNHKKRRKIGDLNTDQNSLNLMPWRSESDQNTYSKKLIEALRQINSPETTTTKPRIAGQVRETADRVLASTAKGRTRWSRAILGKWKKLRRHHRKVKKTASGLNRAGIEKERIRRLPAVQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGGTSAGIAGQVLS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03576 192 MobiDBLite consensus disorder prediction 1 24 - -
Tsu01g03576 192 PANTHER TRANSCRIPTION FACTOR BHLH150 11 191 - -
Tsu01g03576 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 191 IPR044660 GO:0006355
Tsu01g03576 192 CDD bHLH_AtIBH1_like 120 175 IPR044549 GO:0006355
Tsu01g03576 192 MobiDBLite consensus disorder prediction 1 31 - -
Tsu01g03576 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 180 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03576 Tsu-Chr1 43682813 43683702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03576 29 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 49.020 3.36e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03576 - - aprc:113873135 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03576 01 43682813 43683702 Tsu01g03576 01 43682813 43683702 ECH