Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03547 ATGGCGAAAGAGCCATTCTCAATTCTATCTGTTGTTGCAGATGTTATTGAGAAAAATAGAAGCCATTTCGATGACATCGATTTCGCTTCAAAAGTTAGAAAATCTGAAGAAGCTTcATCAAGAAGGAATGAAGCAGCTAAGTGGTTGCGAAATATAGTTGGAGGAAAAGATATGTTGGATGAACCTTCTGAAGAAGCTTTCAGGATTGCATTGCGTAGTGGCATTATCCTTTGCACTGCTCTCAACAACGTTCAACCTGGTGCTGTACCCAATGTATATATCATCATTCTTGTTAGTTATTGCCaatCACTATCTGTTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTAACTATGGAGGAGATGGGGCTTCCAACATTTGACGCTTCTGATTTGGAACAGggAGGGAACTTATCAAGGAtagtgaattgtgttttagcACTTAAATCGTATAGTGAATGGAAACTAGAAGGCAAAAATGGATTGTGGAAATATGGGGGGAGTCCAAAACCACTATCACCTACCTTTGCGAAAATATTTGTTAGGAAAAACTCAATACCATTCATGAGGTCTTTGTCTAGAGGAACTGCTACACCCTTGGGCGACAAAGATGGTTCGCTGAGTGAACACTCTTCAAGCATTGATGCTGTACTTAATGATGCTGTACTTAATGATGGCAGTGAAGAGGGTTCTATTTCTTCCTTGTATTCACTAGTTCGTGAAATTTTGCATGATaagaagcaagaagaaattCCATTTATAGTAGAGTCTCTGCTTAGTAAAGTCATGGAAGAGTTTGAAAGTCGCGCGATCACAGTACAACAAGAAATAGTGCGACAAGAAACGatggaagaaaatgaagatgtAGAACTTGAGCAAAAGCAAAATCATGATGTAAAGTACCATGACGATGAAAACTCAAGTATAAAGTTTTTGAAGCAGCAACAGATAATTCAAAGGCAACATGAAAACATCCAGGAATTGAAAATGATTGTTAATCAAACAAAAGCAGGAATGCACTGTCTAAATGAGAAATACAGGGAGGATTTCATTTGTCTAGGTAGTCATCTGCATAGCCTATCTACTTCTGCTTCAAGATATCAGAAAGTTCTAGAAGAAAACCGCAAATTATACAATCAGATGCAGGACTTGAAAGGTAATATTAGAGTGTACTGTAGAGTTCGCCCCTTAAAAGGGCAACAAAACAATTGTGGTGTTGTCGGTAGTGTAGAGGAAGAAAGTATTTCACTCATAACGCCTTCTAAGAATGGAAAAGAGGTGAAGAAGACATTTACTTTTAACAAAGTGTTTGGTCCTTCTGCAACTCAAGGGGAGGTTTTCTCAGATACACAACCTCTGATTCGTTCTGTTTTGGATGGATTCAATGTTTGTATATTTGCCTACGGCCAGACAGGGTCAGGAAAAACACACACTATGTCTGGACCAGACAATCTTACTGAGGAAACAGTTGGTGTCAACTACCGTGCTTTGAGGGATCTTTTCTGTCTCGTAGAACAAAGGAAAGACACCATTCACTATGATATCTCTGTCCAGATGCTTGAGATATACAATGAGCAAGTTAGAGACCTACTAATGACAGACGCTTCTAATTCTAACAAAAGATTAGAAATTCGCAACAGTTCCCATAATGGTATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTGCTGATGTCTTAAATTTGATGAGCTTGGGACAAAAGAATCGAGCAGTTGGTTCTACTGCCATGAATGAACGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTTCATCAGGAAATGGTCTTCGTGGATGTATCCACCTAGTTGATTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTGACAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCGCTTTCCGCTTTAGGAGATGTAATTTCTTCCCTCGCCCAAAAGCAATCGCATGTTCCTTACCGCAACAGTAAACTTACTCAATTACTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAATCAATTAGTACACTGAAGTTTGCTGAAAGAGTCTCAACTATTGAACTTGGTGCAGCACGAGCTAATAAAGAGAGCGGCGAAGTGAAAGAGCTGAAGGAACAGATTGCTAGTCTAAAGGAAACCATAGCGAGGATGAAGGATGGAGAGTTGGAACACTTTAAACAGCCTTCAAATAGAACTACCAGAGGCCGTAAGCTACCAAGAGATGATTTTAGTAGCACCGAGGACCCTAAAAAGGCTTCACCAAAGCCAAAAAGTCGAAGCATTGATATCGGAGACATATATTGGAATTCACCTACATGGTCAGATTCACATGGTGGGGTAAATGGAAATGAGGATGATAAGGAATCGATTTCTTGTGGAAGTATGTATAGGGATGATGGCTTAACAACTGATGATAGCTTCTCGGTACAGTGGGACACAGAAAGCAAACAATCATCTCCATTGTGGATGGCCACCACCACATCCACAAATGATTCTGATGATTTTGAGTTTGACACTAGTGTATGTTCAGAACCAGACATGAATTGGCAACCACATTCACCAAAAACAACCGCCATTTCCAGTTTATCAGCGTCTAGACCAAAGAGATCAGTTCATGTCAGACAAGCGAAGAACTTAGAAACCAGGAGTACGATCCCATCGATGCCTCCTTCATCGCCAAGAAAACATGCCACCTTAGCGAGCCAAGCAAGAAAGCATTCAGGTTCAATTGATGCTAAAAGAAGAAGTGGAAATGCCAAATGA 2850 0.3961 MAKEPFSILSVVADVIEKNRSHFDDIDFASKVRKSEEASSRRNEAAKWLRNIVGGKDMLDEPSEEAFRIALRSGIILCTALNNVQPGAVPNVYIIILVSYCQSLSVYQYFENVRNFLVTMEEMGLPTFDASDLEQGGNLSRIVNCVLALKSYSEWKLEGKNGLWKYGGSPKPLSPTFAKIFVRKNSIPFMRSLSRGTATPLGDKDGSLSEHSSSIDAVLNDAVLNDGSEEGSISSLYSLVREILHDKKQEEIPFIVESLLSKVMEEFESRAITVQQEIVRQETMEENEDVELEQKQNHDVKYHDDENSSIKFLKQQQIIQRQHENIQELKMIVNQTKAGMHCLNEKYREDFICLGSHLHSLSTSASRYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLKGQQNNCGVVGSVEEESISLITPSKNGKEVKKTFTFNKVFGPSATQGEVFSDTQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNLTEETVGVNYRALRDLFCLVEQRKDTIHYDISVQMLEIYNEQVRDLLMTDASNSNKRLEIRNSSHNGINVPDANLVPVSSTADVLNLMSLGQKNRAVGSTAMNERSSRSHSCLTVHVQGRELSSGNGLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGESISTLKFAERVSTIELGAARANKESGEVKELKEQIASLKETIARMKDGELEHFKQPSNRTTRGRKLPRDDFSSTEDPKKASPKPKSRSIDIGDIYWNSPTWSDSHGGVNGNEDDKESISCGSMYRDDGLTTDDSFSVQWDTESKQSSPLWMATTTSTNDSDDFEFDTSVCSEPDMNWQPHSPKTTAISSLSASRPKRSVHVRQAKNLETRSTIPSMPPSSPRKHATLASQARKHSGSIDAKRRSGNAK 949
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03547 949 CDD KISc_C_terminal 386 717 - -
Tsu01g03547 949 MobiDBLite consensus disorder prediction 747 787 - -
Tsu01g03547 949 SUPERFAMILY Calponin-homology domain, CH-domain 36 167 IPR036872 -
Tsu01g03547 949 SMART ch_5 41 152 IPR001715 GO:0005515
Tsu01g03547 949 Gene3D Kinesin motor domain 383 755 IPR036961 -
Tsu01g03547 949 MobiDBLite consensus disorder prediction 839 865 - -
Tsu01g03547 949 Pfam Calponin homology (CH) domain 40 154 IPR001715 GO:0005515
Tsu01g03547 949 ProSiteProfiles Calponin homology (CH) domain profile. 39 154 IPR001715 GO:0005515
Tsu01g03547 949 SMART kinesin_4 386 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03547 949 Coils Coil 722 749 - -
Tsu01g03547 949 MobiDBLite consensus disorder prediction 906 934 - -
Tsu01g03547 949 MobiDBLite consensus disorder prediction 839 949 - -
Tsu01g03547 949 Pfam Kinesin motor domain 394 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03547 949 Gene3D - 24 165 IPR036872 -
Tsu01g03547 949 ProSiteProfiles Kinesin motor domain profile. 388 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03547 949 MobiDBLite consensus disorder prediction 872 897 - -
Tsu01g03547 949 MobiDBLite consensus disorder prediction 747 826 - -
Tsu01g03547 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 747 IPR027417 -
Tsu01g03547 949 Coils Coil 368 388 - -
Tsu01g03547 949 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 934 - -
Tsu01g03547 949 PANTHER KINESIN-LIKE PROTEIN KIN-14H 5 934 - -
Tsu01g03547 949 MobiDBLite consensus disorder prediction 794 808 - -
Tsu01g03547 949 PRINTS Kinesin heavy chain signature 585 602 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03547 949 PRINTS Kinesin heavy chain signature 616 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03547 949 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03547 949 PRINTS Kinesin heavy chain signature 665 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu01g03547 Tsu-Chr1 43422542 43428575 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03547 376 752 Calmodulin-binding Proteins AT5G65930 41.316 6.58e-78 275
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03547 K10406 - gmx:100808197 1125.92