Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g03547 | ATGGCGAAAGAGCCATTCTCAATTCTATCTGTTGTTGCAGATGTTATTGAGAAAAATAGAAGCCATTTCGATGACATCGATTTCGCTTCAAAAGTTAGAAAATCTGAAGAAGCTTcATCAAGAAGGAATGAAGCAGCTAAGTGGTTGCGAAATATAGTTGGAGGAAAAGATATGTTGGATGAACCTTCTGAAGAAGCTTTCAGGATTGCATTGCGTAGTGGCATTATCCTTTGCACTGCTCTCAACAACGTTCAACCTGGTGCTGTACCCAATGTATATATCATCATTCTTGTTAGTTATTGCCaatCACTATCTGTTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTAACTATGGAGGAGATGGGGCTTCCAACATTTGACGCTTCTGATTTGGAACAGggAGGGAACTTATCAAGGAtagtgaattgtgttttagcACTTAAATCGTATAGTGAATGGAAACTAGAAGGCAAAAATGGATTGTGGAAATATGGGGGGAGTCCAAAACCACTATCACCTACCTTTGCGAAAATATTTGTTAGGAAAAACTCAATACCATTCATGAGGTCTTTGTCTAGAGGAACTGCTACACCCTTGGGCGACAAAGATGGTTCGCTGAGTGAACACTCTTCAAGCATTGATGCTGTACTTAATGATGCTGTACTTAATGATGGCAGTGAAGAGGGTTCTATTTCTTCCTTGTATTCACTAGTTCGTGAAATTTTGCATGATaagaagcaagaagaaattCCATTTATAGTAGAGTCTCTGCTTAGTAAAGTCATGGAAGAGTTTGAAAGTCGCGCGATCACAGTACAACAAGAAATAGTGCGACAAGAAACGatggaagaaaatgaagatgtAGAACTTGAGCAAAAGCAAAATCATGATGTAAAGTACCATGACGATGAAAACTCAAGTATAAAGTTTTTGAAGCAGCAACAGATAATTCAAAGGCAACATGAAAACATCCAGGAATTGAAAATGATTGTTAATCAAACAAAAGCAGGAATGCACTGTCTAAATGAGAAATACAGGGAGGATTTCATTTGTCTAGGTAGTCATCTGCATAGCCTATCTACTTCTGCTTCAAGATATCAGAAAGTTCTAGAAGAAAACCGCAAATTATACAATCAGATGCAGGACTTGAAAGGTAATATTAGAGTGTACTGTAGAGTTCGCCCCTTAAAAGGGCAACAAAACAATTGTGGTGTTGTCGGTAGTGTAGAGGAAGAAAGTATTTCACTCATAACGCCTTCTAAGAATGGAAAAGAGGTGAAGAAGACATTTACTTTTAACAAAGTGTTTGGTCCTTCTGCAACTCAAGGGGAGGTTTTCTCAGATACACAACCTCTGATTCGTTCTGTTTTGGATGGATTCAATGTTTGTATATTTGCCTACGGCCAGACAGGGTCAGGAAAAACACACACTATGTCTGGACCAGACAATCTTACTGAGGAAACAGTTGGTGTCAACTACCGTGCTTTGAGGGATCTTTTCTGTCTCGTAGAACAAAGGAAAGACACCATTCACTATGATATCTCTGTCCAGATGCTTGAGATATACAATGAGCAAGTTAGAGACCTACTAATGACAGACGCTTCTAATTCTAACAAAAGATTAGAAATTCGCAACAGTTCCCATAATGGTATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTGCTGATGTCTTAAATTTGATGAGCTTGGGACAAAAGAATCGAGCAGTTGGTTCTACTGCCATGAATGAACGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTTCATCAGGAAATGGTCTTCGTGGATGTATCCACCTAGTTGATTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTGACAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCGCTTTCCGCTTTAGGAGATGTAATTTCTTCCCTCGCCCAAAAGCAATCGCATGTTCCTTACCGCAACAGTAAACTTACTCAATTACTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAATCAATTAGTACACTGAAGTTTGCTGAAAGAGTCTCAACTATTGAACTTGGTGCAGCACGAGCTAATAAAGAGAGCGGCGAAGTGAAAGAGCTGAAGGAACAGATTGCTAGTCTAAAGGAAACCATAGCGAGGATGAAGGATGGAGAGTTGGAACACTTTAAACAGCCTTCAAATAGAACTACCAGAGGCCGTAAGCTACCAAGAGATGATTTTAGTAGCACCGAGGACCCTAAAAAGGCTTCACCAAAGCCAAAAAGTCGAAGCATTGATATCGGAGACATATATTGGAATTCACCTACATGGTCAGATTCACATGGTGGGGTAAATGGAAATGAGGATGATAAGGAATCGATTTCTTGTGGAAGTATGTATAGGGATGATGGCTTAACAACTGATGATAGCTTCTCGGTACAGTGGGACACAGAAAGCAAACAATCATCTCCATTGTGGATGGCCACCACCACATCCACAAATGATTCTGATGATTTTGAGTTTGACACTAGTGTATGTTCAGAACCAGACATGAATTGGCAACCACATTCACCAAAAACAACCGCCATTTCCAGTTTATCAGCGTCTAGACCAAAGAGATCAGTTCATGTCAGACAAGCGAAGAACTTAGAAACCAGGAGTACGATCCCATCGATGCCTCCTTCATCGCCAAGAAAACATGCCACCTTAGCGAGCCAAGCAAGAAAGCATTCAGGTTCAATTGATGCTAAAAGAAGAAGTGGAAATGCCAAATGA | 2850 | 0.3961 | MAKEPFSILSVVADVIEKNRSHFDDIDFASKVRKSEEASSRRNEAAKWLRNIVGGKDMLDEPSEEAFRIALRSGIILCTALNNVQPGAVPNVYIIILVSYCQSLSVYQYFENVRNFLVTMEEMGLPTFDASDLEQGGNLSRIVNCVLALKSYSEWKLEGKNGLWKYGGSPKPLSPTFAKIFVRKNSIPFMRSLSRGTATPLGDKDGSLSEHSSSIDAVLNDAVLNDGSEEGSISSLYSLVREILHDKKQEEIPFIVESLLSKVMEEFESRAITVQQEIVRQETMEENEDVELEQKQNHDVKYHDDENSSIKFLKQQQIIQRQHENIQELKMIVNQTKAGMHCLNEKYREDFICLGSHLHSLSTSASRYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLKGQQNNCGVVGSVEEESISLITPSKNGKEVKKTFTFNKVFGPSATQGEVFSDTQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNLTEETVGVNYRALRDLFCLVEQRKDTIHYDISVQMLEIYNEQVRDLLMTDASNSNKRLEIRNSSHNGINVPDANLVPVSSTADVLNLMSLGQKNRAVGSTAMNERSSRSHSCLTVHVQGRELSSGNGLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGESISTLKFAERVSTIELGAARANKESGEVKELKEQIASLKETIARMKDGELEHFKQPSNRTTRGRKLPRDDFSSTEDPKKASPKPKSRSIDIGDIYWNSPTWSDSHGGVNGNEDDKESISCGSMYRDDGLTTDDSFSVQWDTESKQSSPLWMATTTSTNDSDDFEFDTSVCSEPDMNWQPHSPKTTAISSLSASRPKRSVHVRQAKNLETRSTIPSMPPSSPRKHATLASQARKHSGSIDAKRRSGNAK | 949 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g03547 | 949 | CDD | KISc_C_terminal | 386 | 717 | - | - | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 747 | 787 | - | - | |
Tsu01g03547 | 949 | SUPERFAMILY | Calponin-homology domain, CH-domain | 36 | 167 | IPR036872 | - | |
Tsu01g03547 | 949 | SMART | ch_5 | 41 | 152 | IPR001715 | GO:0005515 | |
Tsu01g03547 | 949 | Gene3D | Kinesin motor domain | 383 | 755 | IPR036961 | - | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 839 | 865 | - | - | |
Tsu01g03547 | 949 | Pfam | Calponin homology (CH) domain | 40 | 154 | IPR001715 | GO:0005515 | |
Tsu01g03547 | 949 | ProSiteProfiles | Calponin homology (CH) domain profile. | 39 | 154 | IPR001715 | GO:0005515 | |
Tsu01g03547 | 949 | SMART | kinesin_4 | 386 | 723 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu01g03547 | 949 | Coils | Coil | 722 | 749 | - | - | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 906 | 934 | - | - | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 839 | 949 | - | - | |
Tsu01g03547 | 949 | Pfam | Kinesin motor domain | 394 | 715 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu01g03547 | 949 | Gene3D | - | 24 | 165 | IPR036872 | - | |
Tsu01g03547 | 949 | ProSiteProfiles | Kinesin motor domain profile. | 388 | 715 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 872 | 897 | - | - | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 747 | 826 | - | - | |
Tsu01g03547 | 949 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 388 | 747 | IPR027417 | - | |
Tsu01g03547 | 949 | Coils | Coil | 368 | 388 | - | - | |
Tsu01g03547 | 949 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 5 | 934 | - | - | |
Tsu01g03547 | 949 | PANTHER | KINESIN-LIKE PROTEIN KIN-14H | 5 | 934 | - | - | |
Tsu01g03547 | 949 | MobiDBLite | consensus disorder prediction | 794 | 808 | - | - | |
Tsu01g03547 | 949 | PRINTS | Kinesin heavy chain signature | 585 | 602 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu01g03547 | 949 | PRINTS | Kinesin heavy chain signature | 616 | 634 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu01g03547 | 949 | PRINTS | Kinesin heavy chain signature | 461 | 482 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu01g03547 | 949 | PRINTS | Kinesin heavy chain signature | 665 | 686 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g03547 | Tsu-Chr1 | 43422542 | 43428575 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g03547 | 376 | 752 | Calmodulin-binding Proteins | AT5G65930 | 41.316 | 6.58e-78 | 275 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g03547 | K10406 | - | gmx:100808197 | 1125.92 |