Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03522 ATGGGTCGTCTAGATGCAGCCGGTTCCAAGGGGAAGAAGAAAGGACTCATAACATTCACCATTGATTGTGCCAAACCAGTTGAAGACAAAATCATGGACATTGCCTCTCTCGAAAAGTTTCTTCAAGAGAGGATTAAGGTTGGTGGTAAACCTGGTGCTCTTGGTGATGCTGTTACTGTTTCACGTGAGAAGAGCAAAATCACTGTTACTTCTGATACCAACTTCTCTAAACGGTATCTCAAGTATTTGACCAAAAAGTACTTGAAGAAACACAATGTACGGGATTGGCTCAGAGTGATTGCTTCTAACAAAGACAGAAATGTTTATGAACTGAGGTACTTCAACATTGCTGAAAATGAAGGAGAGGAAGAAGATTAA 378 0.4048 MGRLDAAGSKGKKKGLITFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKPGALGDAVTVSREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03522 125 Gene3D - 6 125 IPR038526 -
Tsu01g03522 125 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 125 - -
Tsu01g03522 125 Pfam Ribosomal L22e protein family 17 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Tsu01g03522 125 PANTHER 60S RIBOSOMAL PROTEIN L22 1 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03522 Tsu-Chr1 43199049 43200739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03522 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.000 1.71e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03522 K02891 - nnu:104598935 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03522 01 43199049 43200739 Tsu01g03522 01 43199049 43200739 ECH
Tsu07g04447 07 49540902 49542847 Tsu01g03522 01 43199049 43200739 PCT