Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03505 atgagTTTTGGTTCTGAGTTTCTTACAATGATCTTCATCATTATCACATTCTTGGTTactttatcatcatcatcatcatcatcacaaagGACTCACATTTTGAGTGTTGGTGGTTTAATCAATGCAGCTGGAAGTTTTCATGTTCATAGTTTACAAGAAAGCTATTTCTTGAAGGAGAAGAATGAAGAACAAAATGAAAAGTTACAAGTTGTGAAAATTTCAGGTTTGGATGAGAATGAAGAGAAAAATGGTTTTATAGTTGAAAAGTTTAGATCTTTACTTGGTTTAAAGAGTTTCCACAAAAGGGTACATTCTAAATCCAACCGCGATTCTGATTCtaattctgattctgattctgattctgatCGGTTTCTTACACCTTCACCTTCTCCATCACAAAACATTGAAGCTGAAGTTGTAGCTCTAGCTCCGGCACCAGCACCGGCACCGGCTCCAACACCTTCTGGATTAATCCATTTTCATCCACATTCTCATcatcaaaaacatcattttcattGGAACAATCCATCTAAAAAGTTtcatcatgatgatgatgatagagGCAAAGCTAAAAAGATACTAGTAGctgtttttgtttctgttgGAATTGTTTCATTGGTTAGTGTTTTTGGTTTAATCTTATTCTGCAGGAAAAAGTTCACAAAtcacaaaaagaagaaaccaaaaagaaCAATGCCTATATGTAGCAAAACAAAAGATAAGGTTAGTTTAAATCAAGGATTAGATCTATTTTATCTTGATGCATTAGGTGAAGATATTGAACAAAATGGTGTTACATTGAAAAAGATTAATGATGATGAAAATAATGTTAGTAGTAGTTCTTTTACTAAGGAAATTGTGGAAATGGAACTAGTAAAAATTGATGAGAaaaattcttcttcttgtggtgataaAATTGTTGGTGAAGATTGTGATTCATCAGAAGATGAAAGTTTTCATTCATTTGTTGATTCACAATCAAATACAAGACTTTCTAATGCTTCAATTTGTAGTCTTAGTGATACACATTCTTTGGTGTCACCTCataattcattttcattattacCAAACCAAACATTTCCTAGTTCTCCACAAAACACAAATGATTCTCACCAACCACAACCACCATTTAGTCCAAAACAAAAAGACcaagaaattgaaaatgaaatctttGTTCAATCTCCTAAAATATCTACTTCCTCACCACCTCCTCCACCACCAACACCGCCTCCTCCGCCGCCGCCTACACCACCATTGAAAATGCCACTTTTTACTTTACATTCACTAACATCTTCATCAAGAGTTTCATCTCACTCTCCACTTTCATTGACATCTCATACCTTATCTTCACCTATAAATTCAGAATCTTCTTCAAGATCAAATCAAAGTCCTGAAAAAGATTCATTTTCTCCATCTCCACCAAATCTTACAAAATCTCCTCTTAGTAACATTCCTCCACCACCATTCCCACCTCCATTTCCAAAAGGAAATAGCAACAACAATGGTAAAGCACCACCTCCTCCACCATATCAATTTCCTCAATCACCACTTGGTAAAGATGGTACACCATTGGCTAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCTGCACCAAATCGTACAATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGCTataatttacaaaattcaattaataatgATGAAAGTAAGAGCAAAACACCATCTCCAGGGAAGCATGTACTCGATCCAAAAAGGTTGCAGAACATAACAATACTCTCAAAAGCTTTGAATGCGACAGCTGAACAAGTATGTGATGCACTAATGcaagGGAAGGGATTGTCTTTGCCACAATTAGAGGCACTAGTGAAAATGGTACCTACCAAGGAAGAAGAGTCTAAACTCTTCAATTATAAAGGCAATATCAATGAATTGGGGTCCGCAGAAAGGTTTGTGAGAGCAGTGCTTAGTGTACCATTTGCTTTTCAAAGAGTTGAAACCATGCTTTACAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGGAACTCTTTTTCAATGCTTGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTGAAACTACTAGAAGCAGTACTCAAAACAGGAAACCGAATGAACGTTGGAACAATAAGAGGAGGCGCAAGAGCATTCAAACTCGATGCTCTACTCAAGCTAGCAGATGTTAAAGGAACAGATGGAAAAACAACCTTACTCCATTTCGTTGTTCAAGAAATCGTCCGTTCAGAAGGAATCAGAGTTTCAGATAGCATAATGGGAAAAATAAGccaaaaaagtaacaaaaacagaacagaagaagaaaaagaagaagattacAGAAAAATGGGACTAGAATTAGTTTCTGGTTTAAGTACTGAATTGTACAATGTTAAAAAGACAGCAACAATTGACTTAGATGTTCTTGCTAGTTCAGTTTCAAATCTATATGATGGAATGGTTATGATGAAACAACTAGTGGAAAATGAGTTGCATGAAGATGAAATGAGTCATAATTTTGTGATGACTATGAAGATATTCTTGCAATATGTTGATGGAAATTTGAAGGAGTTAAGAGGTGAAGAAGATAGAGTAATAGCACGTGTTAAAGAAATAACTGAGTATTTTCATGGTGATGTTAGTAAAGAAGATAATCCATTAAGGATATTTGTGATAGTGAGAGATTTTATGGGAATGTTGGATCATGTTTGTAAAGAGCTAAGAAAGTCTAAAGGCTCACGTACTCCAAATCCTCTTGCTCCTTTCAGATAG 2817 0.3262 MSFGSEFLTMIFIIITFLVTLSSSSSSSQRTHILSVGGLINAAGSFHVHSLQESYFLKEKNEEQNEKLQVVKISGLDENEEKNGFIVEKFRSLLGLKSFHKRVHSKSNRDSDSNSDSDSDSDRFLTPSPSPSQNIEAEVVALAPAPAPAPAPTPSGLIHFHPHSHHQKHHFHWNNPSKKFHHDDDDRGKAKKILVAVFVSVGIVSLVSVFGLILFCRKKFTNHKKKKPKRTMPICSKTKDKVSLNQGLDLFYLDALGEDIEQNGVTLKKINDDENNVSSSSFTKEIVEMELVKIDEKNSSSCGDKIVGEDCDSSEDESFHSFVDSQSNTRLSNASICSLSDTHSLVSPHNSFSLLPNQTFPSSPQNTNDSHQPQPPFSPKQKDQEIENEIFVQSPKISTSSPPPPPPTPPPPPPPTPPLKMPLFTLHSLTSSSRVSSHSPLSLTSHTLSSPINSESSSRSNQSPEKDSFSPSPPNLTKSPLSNIPPPPFPPPFPKGNSNNNGKAPPPPPYQFPQSPLGKDGTPLAKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSINNDESKSKTPSPGKHVLDPKRLQNITILSKALNATAEQVCDALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGNINELGSAERFVRAVLSVPFAFQRVETMLYKETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSNKNRTEEEKEEDYRKMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLYDGMVMMKQLVENELHEDEMSHNFVMTMKIFLQYVDGNLKELRGEEDRVIARVKEITEYFHGDVSKEDNPLRIFVIVRDFMGMLDHVCKELRKSKGSRTPNPLAPFR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03505 938 MobiDBLite consensus disorder prediction 105 119 - -
Tsu01g03505 938 SUPERFAMILY Formin homology 2 domain (FH2 domain) 530 925 - -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 425 477 - -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 305 325 - -
Tsu01g03505 938 SMART it6_source 517 930 IPR015425 -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 478 514 - -
Tsu01g03505 938 Gene3D Formin, FH2 domain 539 931 IPR042201 -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 161 176 - -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 350 381 - -
Tsu01g03505 938 ProSiteProfiles Formin homology-2 (FH2) domain profile. 517 938 IPR015425 -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 104 131 - -
Tsu01g03505 938 PANTHER FORMIN-LIKE PROTEIN 65 407 - -
Tsu01g03505 938 PANTHER FORMIN-LIKE PROTEIN 406 938 - -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 145 185 - -
Tsu01g03505 938 Pfam Formin Homology 2 Domain 520 915 IPR015425 -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 305 319 - -
Tsu01g03505 938 MobiDBLite consensus disorder prediction 398 421 - -
Tsu01g03505 938 PANTHER FORMIN-RELATED 65 407 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu01g03505 938 PANTHER FORMIN-RELATED 406 938 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu01g03505 938 MobiDBLite consensus disorder prediction 350 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03505 Tsu-Chr1 43059299 43063597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03505 446 938 FH2 protein (formin) Gene Family AT3G05470 69.261 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03505 - - gmx:100811929 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03505 01 43059299 43063597 Tsu01g03505 01 43059299 43063597 ECH