Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03483 ATGGAAATGAACGATCAAAgcattcaaattcaaatgctCGCTGAGAAATTTCACCTTTTCGTTCGTGATTGCGAACTCAAGCAATCGCCAAACGCAAATTCCTCAGAtaatgatgaatcaaagaaagTAAACGAAAACTCTGGTTCCATGGATGAAAACAGTATGTCTAATGGAATTCATGAGAATTCATCGGATCTGGATCACACGCTTCCGATTTTGAAGAAAGTCTTTGATCTGAGTACCAAAGTTCAGGATTTGAAGAAACAACATGTAGCCTTAACTGATCATGTGAAATCAACAACTGAATCCTTTCCAGGCCTTGATGTTTTGAACTCTATTCAGCTTATCGGTTCTGAATATGAACTCTTGAAAAGAAAGTATCTGGATGAATCCGCTGAGCGTAAGCGGCTTTacaatgaaataattgaattaaaggGTAACATCAGGGTTTTCTGCAGATGCAGACCTTTAAGTGAAAGTGAAAGGGCAAATGGATTGACATCTGTTGTCAATTTTGAATCGACTCTTGATAATGAGCTTCAAGTCATTTCCTCAGATTCTTCAAAGAAGCCGTTTAAATTTGATCATGTATTTAGGCCAGAAGATAACCAAGAGGCTGTTTTTTCTCAAACTAAACCTATTGCTACATCAGTATTGGATGGTTTTAATGTCTGTATATTTGCTTATGGGCAAACTGGAACCGGTAAAACATTTACAATGGAGGGAACACCAGAAGAGCGGGGAGTTAACTACCGAACACTTGAAGAATTGTTTAGGATATCTAAAGAGAGAAACGGTGTAATGAAGTATGACTTACATGTTAGTATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTTTTGGTGGAAAACTCTACCCAGCCTGCTAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACACAAGAAGTCCCAGGACTTGTTGAAGCTCATGTCCATGGAACAGAAGATGTGTGGGAATTGCTCAAGACTGGAAATAGAGTCAGATCTGTTGGCTCCACCTCTGCCAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACAGTCATCGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCAGGTAGCGAGCGTGTGGGAAAAACCGAAGCTGAGGGAGAAAGATTAAAGGAATCTCAATTCATAAACAAGTCTCTTTCAGCACTAGGTGATGTTATTTCTGCTCTTGCTTCCAAAGCAGCCCACATCCCTTACAGAAACTCGAAGCTCACTCATATACTGCAAAGCTCTTTAGGAGGAGATTGTAAAACACTAATGTTTGTTCAAGTAAGTCCAAGCTCGTCCGACTTAGGAGAGACACTATGTTCACTGAATTTTGCCACACGTGTTCGAGGAATTGAGAGTGGCCCAGCTCGCAAACAAGTAGACCTCAGTGAGCTCTTTAAGTACAAACAAATGGCAGAAAAGGCCAAACACGACGAGAAGGAAACAAAGAAGTTACAGGATAGCCTGCAAACTTTGCAACTCAGACTTGCTGCGAGAGAATACCATTGTAAAAGCCTTCAAGAAAAGGTACGGGACCTGGAGAATCAAGTAgcagaagaaagaaaaactagACTAAAGCAAGAAAGTAGATCACTTGCTGCTGTTTCATCTCAACCTCCAACATATAAACACACAGCAGCTCATAAAACCATGACAGATAAGAAACCACCACTGAATCCTTCAAAACTGAGAATGCCCCTTAGAAGGATAACCAATTTCTTGCCTCCCCCATCTCCTACAACATCAAAGAGATACACATACACACAGCAAATGAACGGAAAGGAAAATTCTGCTCGAAGGAATTCAATGACAACAAACACAGAAAGCTTTGCAAGACCAAGAAGCAGGGTATCCATTGCTATGAGACCACCACCTGTACAACCAACAACACAGATCCTTAAGCCAAGGAGAAGAGTCTCCATTGCTACACTTCGTCCTGATCCAACATCTGAAATGACAACTCCACTTCGTCCCTCAGCTTCGAGATTTACCAGTGGAAGCAATGCACCAGTGATGAGGAGCCAAAGGAGTCGGTATTCAAATTTGTTTGCCCCATTGCCAGCGGTGAGAGCAGATACAACACCAATGTCTGTTGGGGGTAGCAGTAAGTTTATGGGCAGTCCAGTACATGCACAGGCAAGTTCACAGGTGGGTAGGCATCCAACCGCAGTTGCGCTGCAAAGGAGATCATTAGTTTGGAGTCCTCTCAGGCTGAGAGAAATGAAAAGCAAGCGAAAATCATCACTCTTGCCATCTCAATTGCAATAG 2328 0.4085 MEMNDQSIQIQMLAEKFHLFVRDCELKQSPNANSSDNDESKKVNENSGSMDENSMSNGIHENSSDLDHTLPILKKVFDLSTKVQDLKKQHVALTDHVKSTTESFPGLDVLNSIQLIGSEYELLKRKYLDESAERKRLYNEIIELKGNIRVFCRCRPLSESERANGLTSVVNFESTLDNELQVISSDSSKKPFKFDHVFRPEDNQEAVFSQTKPIATSVLDGFNVCIFAYGQTGTGKTFTMEGTPEERGVNYRTLEELFRISKERNGVMKYDLHVSMLEVYNEKIRDLLVENSTQPAKKLEIKQAAEGTQEVPGLVEAHVHGTEDVWELLKTGNRVRSVGSTSANELSSRSHCLLRVTVIGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKAAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSSSDLGETLCSLNFATRVRGIESGPARKQVDLSELFKYKQMAEKAKHDEKETKKLQDSLQTLQLRLAAREYHCKSLQEKVRDLENQVAEERKTRLKQESRSLAAVSSQPPTYKHTAAHKTMTDKKPPLNPSKLRMPLRRITNFLPPPSPTTSKRYTYTQQMNGKENSARRNSMTTNTESFARPRSRVSIAMRPPPVQPTTQILKPRRRVSIATLRPDPTSEMTTPLRPSASRFTSGSNAPVMRSQRSRYSNLFAPLPAVRADTTPMSVGGSSKFMGSPVHAQASSQVGRHPTAVALQRRSLVWSPLRLREMKSKRKSSLLPSQLQ 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03483 775 ProSiteProfiles Kinesin motor domain profile. 147 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 ProSitePatterns Kinesin motor domain signature. 371 382 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu01g03483 775 CDD KISc_C_terminal 145 472 - -
Tsu01g03483 775 Pfam Kinesin motor domain 153 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 Gene3D Kinesin motor domain 142 513 IPR036961 -
Tsu01g03483 775 SMART kinesin_4 145 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 MobiDBLite consensus disorder prediction 28 64 - -
Tsu01g03483 775 Coils Coil 516 550 - -
Tsu01g03483 775 PRINTS Kinesin heavy chain signature 221 242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 PRINTS Kinesin heavy chain signature 341 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 PRINTS Kinesin heavy chain signature 421 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 PRINTS Kinesin heavy chain signature 372 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03483 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 505 IPR027417 -
Tsu01g03483 775 MobiDBLite consensus disorder prediction 549 565 - -
Tsu01g03483 775 MobiDBLite consensus disorder prediction 543 583 - -
Tsu01g03483 775 PANTHER KINESIN-LIKE PROTEIN KIN-14S 85 771 - -
Tsu01g03483 775 MobiDBLite consensus disorder prediction 610 631 - -
Tsu01g03483 775 PANTHER KINESIN-RELATED 85 771 IPR027640 GO:0003777|GO:0007018
Tsu01g03483 775 MobiDBLite consensus disorder prediction 666 692 - -
Tsu01g03483 775 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03483 Tsu-Chr1 42897149 42901241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03483 113 492 Calmodulin-binding Proteins AT5G65930 42.559 1.42e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03483 K10406 - gmx:100788477 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03483 01 42897149 42901241 Tsu01g03483 01 42897149 42901241 ECH