Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03471 ATGGCAGAGTTGGTTGTTGAGGCATtactttcttcttcctttcaaGTGATTTTCGAGAGGTTGGCTTCGGTTGATATCAGAGACTACTTTGGTGGTAATAAACTTGATAAGCTGGTGAAAGAACTTGTTATTGAACTCAATTCTATCAACCATGTCTTGGAAGAAGCAGAGATAAAGCAGTACCAAAACACACATGTGAAGAAGTGGCTTGATGAACTTAAACATGTTGTTTATGAGGCAGAACAAATTTTGGATGAGATTGATACTGATGCAATGTTGAAAAAGATGAAAGCTGAATCTGAACCTGTTACCACTAATGTATTGGGctttttttcatctttaacTACAAATCCATATGAATATAGGATCAATGAACTACTGGAGAAACTAGAATTACTTGCCACTCAAACGAAAAGGTTGGGATTGGAAGATGGTCCTTGTGCTGGTAGAGAAGGCTTAGTCAGTTGGAAACCATCAAAAAGATTGATAACTACAGCTCTTGTGGATGAGTCAAGCATATTTGGTAGAGATGTTCATAAGGGAAAACTTGTCAAATTTTTACTTGAAGGCAATGACAGTGGCAACCAAGTTCCAATAATCAGCATAGTTGGTTTAGGAGGGATGGGAAAAACCACCCTTGCTAAGCTTGTGTACAATGACGAGAAGATAAAGGAGCATTTTAAACTTGAAGCATGGGTCTATGTTTCAGAATCTTTTGATGTTGTTGGACTCACCAAAACAATTCTCAAGTCATTTAATTCTTCACCAGATGGCGAAGACTTGAATCTACTCCAACATCAACTGCAACACTTACTATCAGGCAAGCAATACTTGCTTGTTTTAGATGATATTTGGAACGGGAATGCGGAATGTTGGGAGCAGTTACTACTTCCGTTTAACCATGGATCTTCTGGAAGTAAGATTATTGTGACAACACGTGAAAAGGAGGTAGCGCATGTCCTGAATTCAACATTATTTGATTTAGAACAATTGGACAAAAGCGACTGTTGGAGTTTATTTGTTACACATGCGTTTCATGGCAAGAATGTGGGTGACTATCCAAATCTTGAATCAATTGGCAAGAAAATTGTCAACAAATGTGGAGGATTGCCTTTAGCTGTAAAAACACTTGGCCAACTCTTGCGAAAAAAATTCTCTGAACATGAATGGAGGAAGATATTAGAGACTGATATGTGGCGATTATCAGATGAGGCAAACAACATTAACCCAGTGCTGAGATTGAGTTACCATAATCTCCCATCTAATCGGAAGCGTTGTTTTGCTTATTGTTCTTTACTTCGCAAAGGTTGGGCCTTTAACAAAGGTGACCTAATCAAGTTCTGGATGGCAGATGATTTGCTGAAGTGTTGTGGAGCAGACAAAAGTGAAGAAGAGTTGGGAAGTGATATTTTTGATGATCTTGAGtcaatttcatttttccaaTCATTTTATGATGCTTTTGTCATGCATGATCTTGTTAATGATTTAGCAAAATCAGTGTCAGGGGAATTTTGTATGCAAATAGAGGGTTCTAGGGTGGAAGGTATCCCTGAAAGAACACGTCACATTTGTTTGTCTCTTCAATCAAATTGTGGGGATAAATTACTAGAGTCAATTTGTGAGCATAAGGGATTACGTAGTCTGATAGTAGAATGCTCCACGGCTACGTTGATATGCAACAATGTGCAACGTGATCTGTTTTCAAGACTAACATGTTTGCGGATGTTATCATTTAGGTATTGCGGTCTCTCAGAGCTAGTTGATGAGATAtgcaatttaaaacttttgcgTTACCTAGACCTTTCTTACAATAATTTTACAAGCTTACCTGATACCATATGTATGTTGTATAATTTGCAAACACTCTTGTTGGAAGGGTGTAAAATGACTGAGCTCCCTTCAAATTTTTCCAAACTCGTCAATTTATGTTACCTTGAACTCCCCTTTGATCATGAAGGCCCTTGTATAAAAAAGATGTCAAACAATATAGGAAAACTGAACAATCTTCAGGCCTTGCCTTACTTTGTTGTGGACGGATCTGATCTTAAAGAGTTTGAGAAACTAAACCATCTTCATGGAGAAATTCATATTAAAAGTTTGGGTAATGTCATTGATTCTGCCGATGCTGTGACAGCAAATTTGAAAGATAAGAAGTATTTAGAAAAATTACATATGGAGTTTGATGGCAGAAGAGAAGAAATGGATGACTTAATAGTTGAAAGCAATGTGTCTGTATTGGAGGCTCTTCAACCAAATAGCAACTTGAAGAGTCTCATCATCTCACACTACAATGGTAACTCTTTTCCAAATTGGTTAAGGGGTTGTCATCTATCCAACTTAGTTTCTCTTGAACTACAAAACTGTGGACTATGTTCTCATTTGCCGTCACTTGGTCAGCTTCATTGTCTCAAGGAGCTTTCCATTTCACATTGTGATGGAATAAAGATCATCGGCGAAGAGTTTTACGACAATAATTCAACAATTCTTCCGTTCAGGTCCCTTgaagttttgatattttatgagATGAAAAATTGGGAGGAATGGTTATGTCCTGAAGGGTTTTCTTTGCTTAAAAAGCtttctattaaaaaatgtccCGAATTGAAAAGGGTCACGCCTCAACATCTTCCTTCTTTACAAAAATTGGAGATTGATGATTGCAACAAGTTGGAGGAATGTTTATGTCTTGAAGGATTTCCCTTGCTAGAAGAgctttcaataaaaaattgtccCGAATTGAAAAGGATCACGCCTCAAGATCTTCCTTCTTTACAAAAACTGGAGATATATGGTTGCAACAAGTTAGAGGAATGGTTATGCCTTGAAGGGTTTCCCTTGCTTGAAGAACTTTCAATTACAAATTGTCCCGAATTGAAAAGGGTCATGCCTAAACATCTTCCTTCTTTACAAAAATTGGAGATAAGTGATTGCAACAAGTTGGAGGAATGGTTATGTCTTGAAGGGTTTCCTTTGCTTAAAGAGCTTTCCATTGAACGTTGTCCCAAATTGAAAAAGGTCCTGCCTCAACATCTTCCTTTGATACAAATGTTGAAGATTAAAGATTGCAAAATGTTGGAGGCATCAATTCCCAAGAGTGATAATATCATAGAGTTAGAAATACAGAATTGTGATCGGGTTTCGGTAAATGAATTGCCGACCAGCTTGAAAAAGTTTGTCCTTTTTGGAAATCGGTGCATGGAGTTCTCCATGGAGCAAAATTTAGTAAACAGTACTATTCTTGAAGTGTTGGTGCTTGATTTCAGAGGCTTTATAAAATGCCCCTTTTTGAATTTGTGTTGCTATAATTCTCTTAGTAGACTTCATATAAAAGGCTGGTGCTCCCCCTCTTTTCCCTTTGAACTACACTTATTCACCAATCTTCGGTATCTCTGGTTGTACGATTTCCCACAGCTGGAATCATTTCCAAGGGGAAGTTTGCCTACCAACTTGAGAGAACTTGTAATAACAAACTTTCCTAAGTTAGTTGCTTTGAGAGAGGACTGGAATTTGTTCCAATTCGATTACTTGTTTTTGTATGACTGTCCAGAATTGGAATCGTTATTTGGGGGAGGTTTGCCTTCCCACTTGAGAGACCTTAGAATACACAATTGCCCTAAACTGATTGCTTTGAGAGAGGAGCAGGGTCTGTTCCAACTCAATTCTTTGGAAGTTTTCGTAGTTAGTGATCATGAGTTTGAAAACGTTGAATTCTTCCCAGAGGAGAATCTGCTGCCACCAACTCTTGAGAATCTTGAGTTGCAAAACTGTTCAAAGCTAAGAACAATGAACTACAAGGGTTTTCTCCACCTCAATTCTCTCAAATCTCTATATATTGTCAACTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGCTCTACCCAGCACCCTTTGTATTTTGTACGTTGAGGATTGTCCTATTCTTGAGGGTTTGCCAGAGGAGGGTCTACCCAGCTCCCTTTCTCGTTTGCGGATTTATGGTTGTCCATTACTCAAGGAGAAATACCAAAAGGAGGGAGGAGTTCGTTGGCATACAATTAGTCACATCCCTTCTGTTGAGATTGACTCTATTAAGCAGAAGTCTGTCTACAAAATCAATTTGCATCGACCAATTACAAGGGTGCTGAAAGAAAAGAGGTAG 4137 0.3737 MAELVVEALLSSSFQVIFERLASVDIRDYFGGNKLDKLVKELVIELNSINHVLEEAEIKQYQNTHVKKWLDELKHVVYEAEQILDEIDTDAMLKKMKAESEPVTTNVLGFFSSLTTNPYEYRINELLEKLELLATQTKRLGLEDGPCAGREGLVSWKPSKRLITTALVDESSIFGRDVHKGKLVKFLLEGNDSGNQVPIISIVGLGGMGKTTLAKLVYNDEKIKEHFKLEAWVYVSESFDVVGLTKTILKSFNSSPDGEDLNLLQHQLQHLLSGKQYLLVLDDIWNGNAECWEQLLLPFNHGSSGSKIIVTTREKEVAHVLNSTLFDLEQLDKSDCWSLFVTHAFHGKNVGDYPNLESIGKKIVNKCGGLPLAVKTLGQLLRKKFSEHEWRKILETDMWRLSDEANNINPVLRLSYHNLPSNRKRCFAYCSLLRKGWAFNKGDLIKFWMADDLLKCCGADKSEEELGSDIFDDLESISFFQSFYDAFVMHDLVNDLAKSVSGEFCMQIEGSRVEGIPERTRHICLSLQSNCGDKLLESICEHKGLRSLIVECSTATLICNNVQRDLFSRLTCLRMLSFRYCGLSELVDEICNLKLLRYLDLSYNNFTSLPDTICMLYNLQTLLLEGCKMTELPSNFSKLVNLCYLELPFDHEGPCIKKMSNNIGKLNNLQALPYFVVDGSDLKEFEKLNHLHGEIHIKSLGNVIDSADAVTANLKDKKYLEKLHMEFDGRREEMDDLIVESNVSVLEALQPNSNLKSLIISHYNGNSFPNWLRGCHLSNLVSLELQNCGLCSHLPSLGQLHCLKELSISHCDGIKIIGEEFYDNNSTILPFRSLEVLIFYEMKNWEEWLCPEGFSLLKKLSIKKCPELKRVTPQHLPSLQKLEIDDCNKLEECLCLEGFPLLEELSIKNCPELKRITPQDLPSLQKLEIYGCNKLEEWLCLEGFPLLEELSITNCPELKRVMPKHLPSLQKLEISDCNKLEEWLCLEGFPLLKELSIERCPKLKKVLPQHLPLIQMLKIKDCKMLEASIPKSDNIIELEIQNCDRVSVNELPTSLKKFVLFGNRCMEFSMEQNLVNSTILEVLVLDFRGFIKCPFLNLCCYNSLSRLHIKGWCSPSFPFELHLFTNLRYLWLYDFPQLESFPRGSLPTNLRELVITNFPKLVALREDWNLFQFDYLFLYDCPELESLFGGGLPSHLRDLRIHNCPKLIALREEQGLFQLNSLEVFVVSDHEFENVEFFPEENLLPPTLENLELQNCSKLRTMNYKGFLHLNSLKSLYIVNCPSLESLPEEALPSTLCILYVEDCPILEGLPEEGLPSSLSRLRIYGCPLLKEKYQKEGGVRWHTISHIPSVEIDSIKQKSVYKINLHRPITRVLKEKR 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03471 1378 Coils Coil 1377 1378 - -
Tsu01g03471 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 430 IPR027417 -
Tsu01g03471 1378 PANTHER DISEASE RESISTANCE PROTEIN RP 22 937 IPR044974 GO:0006952
Tsu01g03471 1378 SUPERFAMILY L domain-like 488 956 - -
Tsu01g03471 1378 Pfam NB-ARC domain 178 418 IPR002182 GO:0043531
Tsu01g03471 1378 Coils Coil 39 59 - -
Tsu01g03471 1378 PANTHER OS05G0414200 PROTEIN 22 937 - -
Tsu01g03471 1378 SMART LRR_typ_2 777 800 IPR003591 -
Tsu01g03471 1378 SMART LRR_typ_2 616 638 IPR003591 -
Tsu01g03471 1378 SMART LRR_typ_2 593 614 IPR003591 -
Tsu01g03471 1378 Gene3D Ribonuclease Inhibitor 533 873 IPR032675 -
Tsu01g03471 1378 SUPERFAMILY L domain-like 1080 1353 - -
Tsu01g03471 1378 Pfam Rx N-terminal domain 10 97 IPR041118 -
Tsu01g03471 1378 Gene3D - 416 500 IPR036388 -
Tsu01g03471 1378 PRINTS Disease resistance protein signature 199 214 - -
Tsu01g03471 1378 PRINTS Disease resistance protein signature 367 381 - -
Tsu01g03471 1378 PRINTS Disease resistance protein signature 271 285 - -
Tsu01g03471 1378 PRINTS Disease resistance protein signature 964 980 - -
Tsu01g03471 1378 Gene3D - 330 415 IPR042197 -
Tsu01g03471 1378 Gene3D - 157 326 IPR027417 -
Tsu01g03471 1378 Gene3D - 14 123 - -
Tsu01g03471 1378 Gene3D Ribonuclease Inhibitor 874 964 IPR032675 -
Tsu01g03471 1378 Gene3D Ribonuclease Inhibitor 1192 1338 IPR032675 -
Tsu01g03471 1378 Gene3D Ribonuclease Inhibitor 1025 1191 IPR032675 -
Tsu01g03471 1378 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03471 Tsu-Chr1 42814633 42819660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03471 200 500 WRKY Transcription Factor Family AT5G45050 23.453 3.31e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03471 - - mtr:MTR_3g022600 1660.97