Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03443 atgtctcacCAAAAAGAGCAAATTACTAAGGTTTTTTCTTCTCCATTTTGTctatcttttttcttctttgtaagTGTGTTTGTCGTGTTTAAGCTTGTGATTAGAAAAcccaaatccaaaacaaatcTAAATCAGATTCCATCTCCACCAAAATTACCAATCATTGGTAATCTTCATCAACTAGGCACTCTTCCACACCGTTCTCTTAGAGACCTATCACTAAAATATGGCAACATGATGTTGTTGCAATTGGGACAAAAACAAACTCTAGTGATTTCATCAGCAGATGTAGTCATGGAAATGATGAAAACTCATGATCTAGCTTTTTCCAACCGACCCCAAAATATAGCTTCAAAAATCTTGTTGTATGGGTGTAAAGACATTGTTTTTGGACAATATGGAGAAAGTTggagacaaaaaagaaaaataagtattgTAGAACTTTTGAGCATGAAAAGTGTAGAATCATTTGGTcaaaatagaaaagaagaaGTTGATGAATTGGTGAATAAGCTACGTGAAGTTATAAGCTCAAATGATGCATGTGTTAATTTAAGTGAGATGTTTCTTTTAACAGCAAACAATATTGTTTGTAAATGTGCTCTTGGTAGGAAGTGTGAAGAGGATAACTTGAAAGAGTTGGGATTGAAGATTTTTTATCATCTTTCAGAATTTGTTGTTGGAGATTACTTTCCTTTGTTGGGTTGGGTTGATATTCTTAGtggaaaaattggaaaaatgaAGGAGACTTTTCAAGAACTAAATGGTTTGTTTGATAAGGTGATTGAAGAGTGTTTGGCAGTAAAGAAGATAGAAAATAATGAATTCAAGAAGAAAGGGTTTGTTGATATTCTCCTTCAACAAAGAGGGGATGACATGCTTGAGTTTGAACTCTCCAATAATGATATTAAAGCAATTATAACGGACATGTTGGTGGGAGGAACTGACACAATTGCAATAACATTAGAATGGGCGTTTTCAGAGCTCATGAGACATCCAATAATAATGAAGAAAGCACAAGAAGAAATAAGAAGAGTTGTAGGCCATAAATTACAAGTAGAAGAAAGTGACATCAATCAAATGCACTATTTAAAGTGTGTAGTGAAAGAAACTCTCCGATTGCATCCTCCTGGTCCTCTTTTGATTCCTCGAGAAACAATATCTAACGTGAAAGTGAAAGGGTATGACATTCCTGCAAAAACAATGGTATATGTAAACACATGGGCAATACAAAGGGACCCTAAAAACTGGGAAAGTCCTGAAGTGTTTATGCCAGAGAGATTTCAACACAACcaaattgattttaaaggtCAAGATTTTCAGTTTATCCCATTTGGTTTTGGGAGAAGGGGATGTCCTGGATATAATTTTGGGATAGTTATTGTTGAATATGTGCTTGCTAGCCTTCTTTATATGTTTGATTGGAAGCTACCTGAAACAAGTATGCAACATATAGATATGAGCGAGGTATTCGCTCTTGCTCTCACGAAGAAAGAACCACTTCTTTTAGAACCAATAGCATTTTCATTTTAA 1533 0.3222 MSHQKEQITKVFSSPFCLSFFFFVSVFVVFKLVIRKPKSKTNLNQIPSPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKQTLVISSADVVMEMMKTHDLAFSNRPQNIASKILLYGCKDIVFGQYGESWRQKRKISIVELLSMKSVESFGQNRKEEVDELVNKLREVISSNDACVNLSEMFLLTANNIVCKCALGRKCEEDNLKELGLKIFYHLSEFVVGDYFPLLGWVDILSGKIGKMKETFQELNGLFDKVIEECLAVKKIENNEFKKKGFVDILLQQRGDDMLEFELSNNDIKAIITDMLVGGTDTIAITLEWAFSELMRHPIIMKKAQEEIRRVVGHKLQVEESDINQMHYLKCVVKETLRLHPPGPLLIPRETISNVKVKGYDIPAKTMVYVNTWAIQRDPKNWESPEVFMPERFQHNQIDFKGQDFQFIPFGFGRRGCPGYNFGIVIVEYVLASLLYMFDWKLPETSMQHIDMSEVFALALTKKEPLLLEPIAFSF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03443 510 Pfam Cytochrome P450 47 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 509 - -
Tsu01g03443 510 PANTHER CYTOCHROME P450 71B11-RELATED 7 509 - -
Tsu01g03443 510 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Tsu01g03443 510 SUPERFAMILY Cytochrome P450 46 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 Gene3D Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03443 510 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03443 Tsu-Chr1 42435344 42437735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03443 47 505 Cytochrome P450 AT3G26330 43.803 5.39e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03443 K20617 - gmx:100803384 640.958