Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03442 ATGGCTCACAAAAAAGAGCAAATTACAGAAGTCTTTTCTTCTCCATTTTGTCTATCTTTTGTCTTCCTTGTAACTGTGTTTGTCGTGTTTAAACTTGTCACTAGAAaacccaaatccaaaaccaCTCTAAATCAGCTTCCATCCCCACCAAAATTACCAATCATTGGTAATCTTCATCAACTAGGCACACTTCCACACCGTTCTCTTAGAGACCTATCACTAAAATATGGCAACATGATGTTGTTGCAATTGGGACAAAAACAAACTCTAGTGATTTCATCAGCAGATGCAGTCATGGAAATGATGAAAACTCATGGTCTAGCTTTTTCCAACCGACCCCAAAATATAGCTTCAAAAATCTTGTTGTATGGGTGTAAAGACATTGTTTTTGGACAATATGGAGAAAGTTggagacaaaaaagaaaaataagtattgTAGAACTTTTGAGCATGAAAAGTGTAGAATCATTTGGTcaaaatagaaaagaagaaGTTGAAGAATTGGTGAATAAGCTACGTGAAGTTATAAGCTCAAATGATGCATGTGTTAATTTAAGTGAGATGTTTCTttcaacaataaataatattatttgtaaatGTGCTCTTGGTGGTAGGAAGTATGAAGACAACAACGTGAAAGAGTTATCAAGGAAGATTTTGTTTCATCTTTCAGAATTTGTTGTTGGAGATTACTTTCCTTTGTTTGGTTGGGTTGATAATCTTAGtggaaaaattggaaaaatcGAAGAGACTTTTCAAGAACAAGATGCTTTGTTTGATAAAGTGATTGAAGAGTGTTTGGCAGTAAAGAAGATAGAAAATAATGAATTCAAGAAGAAAGGGTTTGTTGATATTCTCCTTCAACTAAGAGAGGATGGCAAGCTTGAGTTTGAGCTCTCCAATAGTGACATTAAAGCAATTATAACGGACATGTTTGTGGGAGGAACtgacacaacaacaacaacattagaaTGGGCATTTTCAGAGCTCATGAGACATCCAatgattatgaaaaaaatacaagaagaaaTAAGAAGAGTTGTAGGCCATAAATTACAAGTAGAAGAAAGCGACATCAATCAAATGCACTATTTAAAGTGTGTAGTGAAAGAAACTCTCAGATTACATCCTCCTGGTCCTCTTTCAGTTTCTCGAGAAACAATATCTAACGTGAAATTGAAAGGGCACGACATTCCTGCAAAAACAATGGTATATGTAAATACATGGGCAATACAAAGGGACCCTAAAAATTGGGAAAGTCCTGAAGTGTTTATGCCAGAGAGATTTCAACACAACCAAATTAATTTTAGAGGTCAAGATTTGCAGTTTATCCCATTTGGTTTTGGGAGAAGGGGATGTCCTGGATATAATTTTGGGATAGTTATTGTTGAATATGTGCTTGCTAGCCTTCTTTATTGGTTTGATTGGAAGCTACCTGAAACAAGTATGCAACATATAGATATGAGTGAGGTATTCGCTCTTGCTCTCACGAAGAAAGAACAACTTCTTTTAGAACCTATAGCATTTTCATTTTAA 1536 0.3236 MAHKKEQITEVFSSPFCLSFVFLVTVFVVFKLVTRKPKSKTTLNQLPSPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKQTLVISSADAVMEMMKTHGLAFSNRPQNIASKILLYGCKDIVFGQYGESWRQKRKISIVELLSMKSVESFGQNRKEEVEELVNKLREVISSNDACVNLSEMFLSTINNIICKCALGGRKYEDNNVKELSRKILFHLSEFVVGDYFPLFGWVDNLSGKIGKIEETFQEQDALFDKVIEECLAVKKIENNEFKKKGFVDILLQLREDGKLEFELSNSDIKAIITDMFVGGTDTTTTTLEWAFSELMRHPMIMKKIQEEIRRVVGHKLQVEESDINQMHYLKCVVKETLRLHPPGPLSVSRETISNVKLKGHDIPAKTMVYVNTWAIQRDPKNWESPEVFMPERFQHNQINFRGQDLQFIPFGFGRRGCPGYNFGIVIVEYVLASLLYWFDWKLPETSMQHIDMSEVFALALTKKEQLLLEPIAFSF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03442 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Tsu01g03442 511 SUPERFAMILY Cytochrome P450 47 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 Pfam Cytochrome P450 47 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PANTHER CYTOCHROME P450 71B11-RELATED 7 510 - -
Tsu01g03442 511 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 Gene3D Cytochrome P450 30 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g03442 511 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03442 Tsu-Chr1 42427249 42431011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03442 35 498 Cytochrome P450 AT3G48270 41.970 6.38e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03442 K20617 - gmx:100803922 637.876