Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03430 ATGGCTGGAAGTAACCAACAACTCAACCCCAATGATTCCAAGATGGTGGTTCCGTTGAACATGTGGGTTTTGATCTCCAATTTTAAGTTAGCATACAATCTTCTCCGTCGTCCTGATGGAACATTCAACCGTGACTTGGCAGAGTTTCTTGATCGAAAAGTTCCCGCAAATGCAAACCCTGTGGATGGAGTTTTCTCCTTTGATGTCATTGTTGACAGGGAAACAAATCTCCTTACTCGAATCTACCGTCCTGTTGAGGGAGATGAAAACCAGGTGAACATTGTTGATCTTGAAAAGCCTGTTACCGCGGAGGTTCTCCCTGTCCTCGTGTTCTTCCATGGTGGAAGTTTCGCACATTCTTCGGCTAACAGTGCTATATATGATACTTTGTGTCGTCGTTTGGTTGGTATTTGTAATGCCGTTGTTGTCTCTGTGAATTATAGGCGTGCACCTGAAAATAGGTATCCTTGTGCTTATGAAGATGGGTGGAAAGCTCTTAAATGGGTTAGTTCTAGAACTTGGCTGCAGAGCAAAAAGGATAACAAGGTTCACATCTACATGGTTGGTGATAGCTCGGGCGGGAACATTCTGCACCATGTTGCCCTGAAAGCATTAGACTCGGAAATTCAGGTTTTGGGAAATATACTGCTCAATCCATTGTTTGGTGGGGAAGAAAGAACAGAATCTGAAAAGCGTCTTGATGGGAGGTATTTCGTTAGGGTTAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCTGAAGGGGAAGACAGAGATCATCACGCGTGTAACCCTTTTGGTCCCAATGGACGAAGCCTTGAAGGGGTTACCTTTCCTAAGAGCCTTGTCGTGGTTGCTGGTTTGGATCTCGTTCAGGATTGGCAATTGGGTTATGCCAAAGGTCTTGAGAAAGCCGGACAAAATGTGAAGTTACTATTTCTGGAGCAAGCCACAATTGGATTTTACCTGCTTCCAAATAATGAGCATTTCTCGCTTGTCATGGATGAGATAAAACAATTTGTCAACTCTGACTGTTCATAG 1041 0.438 MAGSNQQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGDENQVNIVDLEKPVTAEVLPVLVFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKALKWVSSRTWLQSKKDNKVHIYMVGDSSGGNILHHVALKALDSEIQVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPNGRSLEGVTFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATIGFYLLPNNEHFSLVMDEIKQFVNSDCS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03430 346 Pfam alpha/beta hydrolase fold 109 322 IPR013094 GO:0016787
Tsu01g03430 346 PANTHER GIBBERELLIN RECEPTOR GID1C 4 341 - -
Tsu01g03430 346 PANTHER ARYLACETAMIDE DEACETYLASE 4 341 - -
Tsu01g03430 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Tsu01g03430 346 SUPERFAMILY alpha/beta-Hydrolases 34 342 IPR029058 -
Tsu01g03430 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 109 125 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03430 Tsu-Chr1 42346821 42349696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03430 1 345 Carbohydrate Esterase AT3G05120 74.277 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03430 K14493 - gmx:100815161 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03430 01 42346821 42349696 Tsu01g03430 01 42346821 42349696 ECH
Tsu07g03521 07 41389212 41391182 Tsu01g03430 01 42346821 42349696 ECH