Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03423 ATGGAGTGCAACAAGGACGAAGCTGTGAGGGCTAAGCAATTGGCAGAAATTAGAATGCAAAGAGGTCAATTTGTAGAGGCACTGAAGTTTGCTAACAAGGCCAAAAAGATGTATGCTGATGTTGATAACATTGCTCAGATCCTTGCAATTTGTGAGGTTCACATTGCTGCATTGAACAAACTCTCTTCTTCTGAAATGGACTGGTATCGTATTCTTCAGACCGAAAGACTCTCCAAGGAAGAAATCATAAAGAAACAGTACAAAAAGCTTGCACTGCTACTTCATcctgataaaaataaatttggtggTGCAGAAGCTGCTTTCAAATTGATTGGGGAAGCCAATAGCGTGTTGACTGACCAAGCAAAGCGGTCTTTACATGACGCGAAGGTTAAAGCCCATGCGAGAGCTGAAGTACCTAAGACCCCATCCCAAACGAGACGTAAAGTACCTAAGACCCCATCCCAAACGAGACATAAAGTACCTAAGACCCGATCCCATGCGAGACGTGCGGTATATGAGGATGACTCCGATGAGGACATGTTTGAAGTATATGAGGATGAGGACATGTTTGAGGTATATGAGGATGAGGAGGATGAACTGTTTGAAGTATATGATATTATCAAACTAatctttatcttctttcttcGTTTATTTTTAGAGTGA 666 0.3964 MECNKDEAVRAKQLAEIRMQRGQFVEALKFANKAKKMYADVDNIAQILAICEVHIAALNKLSSSEMDWYRILQTERLSKEEIIKKQYKKLALLLHPDKNKFGGAEAAFKLIGEANSVLTDQAKRSLHDAKVKAHARAEVPKTPSQTRRKVPKTPSQTRHKVPKTRSHARRAVYEDDSDEDMFEVYEDEDMFEVYEDEEDELFEVYDIIKLIFIFFLRLFLE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03423 221 MobiDBLite consensus disorder prediction 134 172 - -
Tsu01g03423 221 PANTHER - 1 149 - -
Tsu01g03423 221 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 149 - -
Tsu01g03423 221 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tsu01g03423 221 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tsu01g03423 221 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tsu01g03423 221 SMART dnaj_3 66 123 IPR001623 -
Tsu01g03423 221 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Tsu01g03423 221 Pfam DnaJ domain 67 128 IPR001623 -
Tsu01g03423 221 MobiDBLite consensus disorder prediction 152 166 - -
Tsu01g03423 221 CDD DnaJ 67 120 IPR001623 -
Tsu01g03423 221 Gene3D DnaJ domain 54 155 IPR036869 -
Tsu01g03423 221 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03423 Tsu-Chr1 42284809 42285474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03423 4 132 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.815 3.16e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03423 - - mtr:MTR_1g060440 218.779