Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03415 ATGTTGGTTTCTAATGGAGAAGAGAAGATTCTACTGTCTTCAGAAAATGAAACTGAGGTATCAAAGTCAGATTCAATTGATGGGTCATTACCGGTTTCAACCGTTTATACCGATGTGGGTGTTGTTCCTGAGCACGAAAAGAATGAGCTTGAACACTTCATATCCAATTTACaaaGAGAAGTTGATGAACTGAGGTTGAAGCAAAGAATAGTTGATGAAAAGAGAAGAGAAGCATTGAGTAAGATATTGGATATCAAAGGGAGCATTAGAGTGTTTTGTAGAATTCGACCGAATCATTTgacagagaagagaagaaattCTGAACCGGTATCAGCTGGATCGGATAGGATTCGTGTTAAGTTGGGAGGAACAAGGAAGGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAAACAAGCCAAGAAAGTGTTTTTGTTGAGGTGGAGCCAATTCTAAGATCTGCAATGGATGGACATAATGTGTGTGTTTTCGCTTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAATGAGCAGCCAGGGATTATTCCTCGTGCTCTCGAAGAACTCTTTCGTCAATCCTCGATAGATGGTTCATcttcttttactttttcaatgagTATGTTGGAAGTTTACATGGGCAATGTTAGGGATCTGCTTGCTCCAAGACAGTCTTCTAGACCACATGAAAATATGACAAAATGTAATCTCAACATCCAAACAGATCCAAAGGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTGCAGATTTCTGATTGTGGTAAAGCCAAATGGTGGTACAACAAGGGAAGAAGATTCAGATCAACCTCGTGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGCGGGGATACGTCGGATGCCAAAAGCGAAACAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTGAAAACCGGGGCTAAAGGACTAACACTTGACGAAGGGCGAGCTATTAATCTCTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACCCAACTACTGAGAGATTCTCTAGGTGATGGCTCAAAGGTCTTGATGCTTGTGCATATTAGCCCTTCTGAAGAAGATGTTTGCGAGACGGTTTGTTCTTTGAACTTTGCTAAGAGAGCAAGAGCAATAGAGTCCAATCGAGAAGTACCAATGgaattgaagaagcaaaaggagaaaaaaattatggagCTCGAGGAAGACATTAAGGAAGCTGAAAAGCAACGTCAAAGTTTAAGGGATCAAATACAGAACGTTGAGTTAAAGTTATGCGAGAATAGAAAGCTCTTTCAAACTGCATATAGTCTTCAGGAAAGTGATTATGAGTTGGTAACCTCTACTAGCCAAAAAGATGATTTCAAAGAGGTCGCCGAAACACCTAAAGCATCTAAGAAGTCTATTCAAAGAATTGTCTCGAATTCGGTGCCTCGATTCATGAGTTCAACTGTTGCTAGTCGGCATAGGCAAATTGCGTCTGAACAAGAAATTGGTGGGAGATCAAAAAGCTTAAGATCAGTAGTCACCAGAAGTTCAATCCAGTTTCCATGTTCACAATCGTTAAGTTATTCAGATCTTCGCATCAAAACAATACTGCGAAGTTCAACTGGAAAATCTCGGTATGCTGAAACAAATAATGTTCCAAATACAGAAAGGCCTAAATGCAACGAATTAGAATCAAAAGTCATAACTCCTCGAAGTACAACGGTTACATCGTCAGATTCAAATTTGAGAGTAACATTGTATCATCATAGAAGAAGAATGTCTAATCTGATCTAA 1884 0.3896 MLVSNGEEKILLSSENETEVSKSDSIDGSLPVSTVYTDVGVVPEHEKNELEHFISNLQREVDELRLKQRIVDEKRREALSKILDIKGSIRVFCRIRPNHLTEKRRNSEPVSAGSDRIRVKLGGTRKDFEFDKVFPQETSQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRQSSIDGSSSFTFSMSMLEVYMGNVRDLLAPRQSSRPHENMTKCNLNIQTDPKGLVEIEGLSEVQISDCGKAKWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDTSDAKSETSKLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETVCSLNFAKRARAIESNREVPMELKKQKEKKIMELEEDIKEAEKQRQSLRDQIQNVELKLCENRKLFQTAYSLQESDYELVTSTSQKDDFKEVAETPKASKKSIQRIVSNSVPRFMSSTVASRHRQIASEQEIGGRSKSLRSVVTRSSIQFPCSQSLSYSDLRIKTILRSSTGKSRYAETNNVPNTERPKCNELESKVITPRSTTVTSSDSNLRVTLYHHRRRMSNLI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03415 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 453 IPR027417 -
Tsu01g03415 627 Pfam Kinesin motor domain 102 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 ProSiteProfiles Kinesin motor domain profile. 88 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 Gene3D Kinesin motor domain 83 458 IPR036961 -
Tsu01g03415 627 SMART kinesin_4 86 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 PANTHER KINESIN-LIKE PROTEIN KLP-3 19 622 - -
Tsu01g03415 627 PRINTS Kinesin heavy chain signature 314 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 PRINTS Kinesin heavy chain signature 157 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 PRINTS Kinesin heavy chain signature 282 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 PRINTS Kinesin heavy chain signature 363 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03415 627 Coils Coil 47 74 - -
Tsu01g03415 627 Coils Coil 424 458 - -
Tsu01g03415 627 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 19 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03415 Tsu-Chr1 42197506 42200697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03415 75 413 Calmodulin-binding Proteins AT5G65930 40.634 7.05e-71 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03415 - - gmx:100785581 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03415 01 42197506 42200697 Tsu01g03415 01 42197506 42200697 ECH