Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03408 ATGGCCTTTTCTCAACAAGTTGAATCCTCATCTCCTTCTATTGTTTTTCCCGTCCGAAGGCGTCAACCGGAGCTCATTGCTCCGGCTACGCCTACACCCCATGAAACTAAGCTACTATCCGACATAGATGAACAAGCCGGTCTTCGCGCCAATATACCAATCATCCAATTCTATCGTAACGAGCCATCAATGGCAGGGAAAGACCCGGTTGAAGTCATAAGAAATGCAATTGCACAAGCACTTGTATTTTACTATCCACTTGCAGGTAGAATTAAGGAAACTGATTCTGGTAATAAACTCATGGTGGATTGTAATGAAGAAGGTGTGATGTTCATTGAAGCTGATGCTGATGTTACACTTGAACAATTTGGTGAAATTAAACCACCTTTTCCATGCTTCCAAGAACTTCTTTATGATGCTGCAGTTCCTGAGGGAGTTCTTAATACTCCCATCCTACTTATACAGgTAACACGTTTAAAATGTGGTGGTTTCATCTTTGCTCTCCGATTTAACCACACTATGGTAGACGGGGTTGGCACAGTTCATTTCATGTTAGCAGTGACAGGAATAGCTAAGGGAGCAAAACAACCTCCAATCCAACCCTCATGGCACAGAGAGCTTCTTAATGCAAGGGATCAACCGCGTGTCACATTTAACCACCTGGAATACGAACAACTAACTGACATCCAAACTGATGCCGTTTTAACTTCAACAGAACTTTCAGAACGATCTTTCTTCTTTGGCCCCACTGAAATAGCCGCAATTCGAAACTTACTTCCACGTGATCTCGATAGCAACTCAACCACCTTCGAAGTCCTCACATCGTACATTTGGCGTTGCCGCACAAAAGTGTTGCAGCCAAATCCAAACGAAGAGGTTCGAATGATGTGCATTGTGGACGCACGTGATAAATTCAATCCTCCAATTCCATTTGGTTACTACGGAAACTGTTTTGCTTTCCCCGCAGCTGTTACAACTGCGGGGGAGCTTTGTGAAAAGCCGTTAGAGTTTGCCGTGGAGTTGATAAAGAAAACGCGCGATGAAGTGAGTGAGGAGTATATACATTCTGTGGCGGATCTAATGGTGACTAAAGGAAAACCATTGTTTACTATAGTGAGGTCTTGTCTTGTGTTGGATACCACATATGCTGGACTTAGAGATTTGAATTTTGGATGGGGGAAGGCAGTGTATGGTGGAATTGCTAAACCTGGGGCAGGGGCTTTTCCTTCAGTACATTTTCATGTTCCGGGTCAAAATGCAAAAGGGGAGGAAGGTATATTGGTTTTGATAGCATTGCCTACTAAAGTTATGCTAGCTTTTGCCAAAGAGTTGGATGACTTGATTGCTTGA 1350 0.4333 MAFSQQVESSSPSIVFPVRRRQPELIAPATPTPHETKLLSDIDEQAGLRANIPIIQFYRNEPSMAGKDPVEVIRNAIAQALVFYYPLAGRIKETDSGNKLMVDCNEEGVMFIEADADVTLEQFGEIKPPFPCFQELLYDAAVPEGVLNTPILLIQVTRLKCGGFIFALRFNHTMVDGVGTVHFMLAVTGIAKGAKQPPIQPSWHRELLNARDQPRVTFNHLEYEQLTDIQTDAVLTSTELSERSFFFGPTEIAAIRNLLPRDLDSNSTTFEVLTSYIWRCRTKVLQPNPNEEVRMMCIVDARDKFNPPIPFGYYGNCFAFPAAVTTAGELCEKPLEFAVELIKKTRDEVSEEYIHSVADLMVTKGKPLFTIVRSCLVLDTTYAGLRDLNFGWGKAVYGGIAKPGAGAFPSVHFHVPGQNAKGEEGILVLIALPTKVMLAFAKELDDLIA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03408 449 Gene3D - 225 444 IPR023213 -
Tsu01g03408 449 Pfam Transferase family 18 445 - -
Tsu01g03408 449 Gene3D - 17 224 IPR023213 -
Tsu01g03408 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 447 - -
Tsu01g03408 449 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 13 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03408 Tsu-Chr1 42109169 42111931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03408 21 444 Monolignol Biosynthesis Gene Families AT5G48930 28.440 2.97e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03408 K19861 - gmx:100820325 663.299