Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03401 ATGCTGAAACCATTAGTTTCTTGGATTTTTTCACCCTCATCGTCTTCCTCCTCCTCgtccgaagaagaagaaagtctTGACATTAACAATGAAGAATCAGACTATGAAAACTTTGAAAATGACAATGTGGAAGACCAAATGGAGAATGTGGATAATGAggaaaatgacaattttttaaatcCATGCGATGTTGATGACACCATTCCCATTGCACCCGCGGCTTCTGATGCATTCCCCGATGTGGCGGTGGCCTTGCCTGCCCTCACAGATGACACAAACACCGCCACCACCTCTGCTGCTACCACTATAGCAACACGCTCGACAAGACAACGCAACAACAAGTATTCAGGCGGCGTTAGACAATATCAGAGGCTATGGACAAAGCAGGACGAGATGGAACTGTTGAAGGGATATCTAGATTACATCAAGCAGCAGGGAAGAACAGGTACCACTCTTCAAAGCGACGTAGCTTCGTTCTACGATCAAGTTATACCTAAATTCAGCACAGATTTCAATAAGAATCAGCTTGTTGAGAAACTACGTAGGTTAAAGAGAAAATACAAGATGGTTTTGGACAAAGGCAAAGAGGTTCAAATTTCTTTCAAGATCCCGCATGAACAGGCCATTTTCGAAATTTCCCACAAGATTTGGGGCAATGAAACAGACCATGATGATTTGGATTTTGCTGAATCAAGACATGTTTCCGAAAGTCCCGATCTTATTGACAAAAGGCCGCAAAAACGTATGAGGTTAACAACAGATGATGTGAACACAAAAAATGACCAGAACTATGGCGACGTAACTAGTATACATGGCTTCATTGAGGAAACCATGAGGTCCTGTTTCTCACCATTGTTGAAGGAATTGTTGGATGATGCTCCTGTAGAGCCACTCGGCGCGTTGCCAATGATGTTATCCACTGGGGAGGTGAGGGATGAGCAATGGTTAAAACAGAGGATTTTGGAGCTTGAGGTGTATTTGAATCGACTGGAGTTGTTGCAGGGTCAGATCAAGGCTAGATTGGAGGAGTTAAAATCTAGCTTAGATTGA 1050 0.4171 MLKPLVSWIFSPSSSSSSSSEEEESLDINNEESDYENFENDNVEDQMENVDNEENDNFLNPCDVDDTIPIAPAASDAFPDVAVALPALTDDTNTATTSAATTIATRSTRQRNNKYSGGVRQYQRLWTKQDEMELLKGYLDYIKQQGRTGTTLQSDVASFYDQVIPKFSTDFNKNQLVEKLRRLKRKYKMVLDKGKEVQISFKIPHEQAIFEISHKIWGNETDHDDLDFAESRHVSESPDLIDKRPQKRMRLTTDDVNTKNDQNYGDVTSIHGFIEETMRSCFSPLLKELLDDAPVEPLGALPMMLSTGEVRDEQWLKQRILELEVYLNRLELLQGQIKARLEELKSSLD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03401 349 MobiDBLite consensus disorder prediction 8 23 - -
Tsu01g03401 349 Coils Coil 327 347 - -
Tsu01g03401 349 Pfam Protein of unknown function, DUF573 123 218 IPR007592 GO:0006355
Tsu01g03401 349 PANTHER BNAANNG10740D PROTEIN-RELATED 1 347 IPR007592 GO:0006355
Tsu01g03401 349 MobiDBLite consensus disorder prediction 1 43 - -
Tsu01g03401 349 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 347 - -
Tsu01g03401 349 Coils Coil 173 193 - -
Tsu01g03401 349 MobiDBLite consensus disorder prediction 24 43 - -
Tsu01g03401 349 Coils Coil 21 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03401 Tsu-Chr1 42055660 42056858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03401 68 346 GeBP Transcription Factor Family AT5G28040 34.637 2.68e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tsu01g03401 DUF573 6.3e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03401 - - gmx:102662842 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04547 07 50322969 50324673 Tsu01g03401 01 42055660 42056858 PCT