Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03381 ATGGATAGGGTCTTCTCAGTGGACGAAATTCCCGACCACTTGTGGTCGCCGCAGATTCACGTTTCCGGTGGCGGCGCCGCCGATGAACAATCTTCCAACATGAGTCGCAGCGCTTCTGAATGGGCTTTTCAACGCTTTCTTCAAGAAGCTGCTACATCTCCTCTTTCTTCCTCTGTTGCTGATGATAACGTCGTTGAAACCGCACCTCTTCCGAAGAAGGACGATGCCGCTGTTTTGAACAATGGTCCTCCGCTTCCACATCCTCCTCCGGTGAACGTTGATTCGGAAGAATATCGTCGAGCTGTGTTGAAGAGTAAGCTGAGTCTTGCCTGTGCTGCTGTTGCCATGACTAGGGGGTCTTTGACTAAATCTCAAGATCTAGCTACTTTTTCTGAGAATGGATCACAGTCGTCTAATCAAGTTGGACCTCAGCCCAGTTTTGAAGGATCTGCTCCTCCTGGAAATGATCCACCTATATTACAAGATAAAGATGCCAAAGTACCACCTGCGATCCCTTCCATTCCTCCTGTCCAGAAAAAAACCGTTGTTGCAACTAGGCCATCGACAAGTGGATCATCAAGAGAACAGTCAGATGACGACGAAGCTGAGGGAGAGACATACATGAATGACAACACAGACCCTACTGACGTAAAACGAGTAAGAAGGATGCTTTCCAATAGAGAGTCAGCTAGACGCTCAAGACGAAGAAAGCAGGCTCATTTAACTGAGTTGGAAACACAGGTTTCTCAATTAAGAGGCGAAAATTCTTCCCTGGTAAAGCGCCTTACTGATGTGAGCCAAAAGTACACTGATTCTGCTGTTGACAACAGAGTACTGAAAGCTGATGTTGAAACGTTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACCGGATTGAACCCAATGTGTCATGTGATGATGCCTGATATATCATCAATGGGCATGCCATCCTTTGATGGAAGCCCTTCAGACAATTCAGCTGATGCGGCTGTTCCTGTGCAAGATGATCCACACCATCACTTCTATCAACCCACCTCGAATAATCCTATGCCGTGTCATGATATGAGAGTCAACAATGGGCTGGGAGACATTTCTTCAATTGAAAATGTACAGCAGAATAATGCAGCAGCAGTTGTAGGTGGCAACAAGATGGGTCAAACAGCTCAAACAGCTTCTCCCTTGCACCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTCGATTCTTGTGGACCATCTTCTAATGGAGAGCAGTAA 1281 0.4668 MDRVFSVDEIPDHLWSPQIHVSGGGAADEQSSNMSRSASEWAFQRFLQEAATSPLSSSVADDNVVETAPLPKKDDAAVLNNGPPLPHPPPVNVDSEEYRRAVLKSKLSLACAAVAMTRGSLTKSQDLATFSENGSQSSNQVGPQPSFEGSAPPGNDPPILQDKDAKVPPAIPSIPPVQKKTVVATRPSTSGSSREQSDDDEAEGETYMNDNTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLVKRLTDVSQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMCHVMMPDISSMGMPSFDGSPSDNSADAAVPVQDDPHHHFYQPTSNNPMPCHDMRVNNGLGDISSIENVQQNNAAAVVGGNKMGQTAQTASPLHRVASLEHLQKRIRGGVDSCGPSSNGEQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03381 426 Gene3D - 217 271 - -
Tsu01g03381 426 PANTHER BASIC LEUCINE ZIPPER 63 1 407 - -
Tsu01g03381 426 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Tsu01g03381 426 PANTHER BZIP TRANSCRIPTION FACTOR 1 407 - -
Tsu01g03381 426 Pfam Basic leucine-zipper C terminal 285 415 IPR020983 -
Tsu01g03381 426 MobiDBLite consensus disorder prediction 15 36 - -
Tsu01g03381 426 MobiDBLite consensus disorder prediction 70 93 - -
Tsu01g03381 426 Pfam bZIP transcription factor 217 268 IPR004827 GO:0003700|GO:0006355
Tsu01g03381 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Tsu01g03381 426 Coils Coil 276 296 - -
Tsu01g03381 426 CDD bZIP_plant_GBF1 219 269 IPR045314 GO:0003700|GO:0006355
Tsu01g03381 426 MobiDBLite consensus disorder prediction 131 217 - -
Tsu01g03381 426 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
Tsu01g03381 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 268 IPR004827 GO:0003700|GO:0006355
Tsu01g03381 426 Coils Coil 227 261 - -
Tsu01g03381 426 MobiDBLite consensus disorder prediction 131 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03381 Tsu-Chr1 41815268 41821583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03381 1 307 bZIP Transcription Factor Family AT4G02640 40.244 1.88e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g03381 bZIP_C 2.5e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03381 K25784 - gmx:100170702 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03381 01 41815268 41821583 Tsu01g03381 01 41815268 41821583 ECH
Tsu07g04577 07 50499486 50502514 Tsu01g03381 01 41815268 41821583 PCT