Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03365 atgacaatttataaAAGTGCATGTATACTGTTTGTTATAATGTGTATACCAATTTTGTTGAATGCACAAAGCAACAAAGATGAATCTTTGATATTAGGGTGTGGTTTAGATGAAAAGGGTGGCAAAGATTCAGATGGAAGACAATGGAATTCGGATAACAAATATGTATCGGGAGGAAATTCGGTAACAGCGAAAGCTTCATTTCAAGATCCTTCACTTTTATCAGAAGTTCCATATATGACAGCTAGAATTTTCACGTCGGAAACAACCTACAAATTGCCGATTCTACCCGATAAACGTTATTGGTTAAGACTTCATTTTTATCCATCTGTTTACAACAATTTCAACCCAGCAGATTCATATTTCTCTGTAACAGCAAATGGTGTTACACTTCTCAACAATTTCAGCTCCTTTATTACATGTCAAGCCTTATCGCAAGCTTATATTGATAGAGAATATGCACTTGCACCTTTGAATTCAGATGTTCTTGAGCTTAAATTCAAACCTTCTGATAAACAGGATGGTGCTTTTGCTTTTGTTAATGGTATTCAGCTTATTCAAATGCCGGATTTGCTATTTGATTCGCCTCCGTTGGTCGGTTATCCAGGCCAAACAGTGGATGCTAAAGGTATGCATATGCAAACCATGTTTAGATTAAATGTTGGTGGGCAATTTATATCTCCGGTTCAGGATTCTGGTTTGAGTCGAACATGGTACGATGATACACCGTACATTTATGGCGCAGCCACTGGTGTTACACTCCATGCTGAGAAGAATGTTACAATTGACTATCAAGCAATGCCTAAATACGTTGCTCCTACCGATGTTTATTCAACTTCAAGATCCATGGGAAGTAATAAAGATGTCAACATGGGATTCAATCTCACATGGATTTTTCAAGTTGATCCGAATTCTATGTACCTTACAAGATTACATTTTTGTGATTACCTTGATACGCTATCGAACGAGGTTGTTTTCAGTATCTTTGTTAACAATCAAACAGCAGAGGATCAAGCCGATGTGATCGGTTGGACAGGAAGTCAAGGAGTGGCGACTTATAAGGATTATGTGGTTTATGTTCATGAAGAGCCGGGTGCTGATCAACTTTGGCTTGCATTGCATCCAAATCCCGCTACAACGCCGAGATATTATGATTCTATGCTCAATGGTGTTGAGATATTCAAACTCAACGATACTAATTTGTCTGGACCAAATCCTCAACTTTCTGATATGATGATGGAGTATGAGGAGAGGTTCAGAAATTTCGAAGACAAAAATGGCCATAGAAAGAATTTTGCTATTGGTGGAGCTGCCGGAGGTGCTGCAGGTTTTGCATTAGTTGCTGCAATATGTATTGCTGTTcatcaaaggaaaaagagaACACCAGGTTCATACACAAACACCACATCAAGTTGGTTACCTCTCTATGGAAATTCACACACCGGAACAAAATCCACATCAGGAAAAAGTACGATGGGTAGTGGTGCAAACTTAGCCATGGCTCAAGGACTATGTCGATATTTCTCTTTACAAGAGATGAGGCAAGCGACCAAGAATTTTGAGGAGTCCAATGTTATTGGGGTAGGAGGATTTGGAAAAGTTTACAAGGGTGTTATTGATAATGGTTTTAAAGTGGCTATTAAGAGATCAAATCCACAATCAGAACAAGGAGTGAATGAATTTCAGACAGAAATCGAGATGCTTTCAAAGCTTAGACATAAACATTTAGTGTCTTTAATTGGTTTTTGTGAGGAAGGTGAGGAAATGTGTTTGGTTTATGATTACATGTCCCATGGAACAATGAGGGAACATTTATACAAAGGAAACAAACCAATAGATACATTATCATGGAAACAAAGGTTAGAAATTTGTATTGGTGCTGCAAGAGGTCTTCATTACCTTCACACAGGAGCAAAGTACACTATAATTCATAGAGATGTCAAAACAACCAACATTCTGcttgatgaaaattttgttgCCAAGGTTTCTGATTTTGGTTTGTCAAAAACAGGTCCAGATATGAACCAGGGTCATGTTAGTACAGTAGTAAAAGGTAGTTTTGGTTATTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAAAAATCCGATGTTTACTCTTTCGGTGTTGTTCTATTCGAGGCATTGTGTTCAAGACCTGCTTTAATGCCTAGTCTTCCAAAGGAACAAGTTAGTCTTGCAGATTGGGCTTTGACGAACAAAAGAAAAGGAACATTGGAGGATATTATTGATCCAAATCTCAAAGGAAAAATCAAACCAGAAAGCTTGAATAAGTTTGCAGATACAGCTGAAAAGTGTTTGTCTGATTCTGGACTCGATCGTCCCTCGATGAATGATCTATTATGGAATCTTGAATTTGCTCTCAACTTACAAGAAAACGATGGTACTTCAAGTTCAAATCATAACAACGCTGCACATATGGATGAGAGTGAATTTGATGAGGTGAATTTGAATCAACGTGATGACATGGCAGCACATTACAAAAACCTTAGCCTTGGAAGTGAACATGACCCTAGTCATGACTCAACTGGGAATTCTGCTGCAATTTTCTCTCAAATCGGCAATCCTAAaggacgatga 2604 0.3737 MTIYKSACILFVIMCIPILLNAQSNKDESLILGCGLDEKGGKDSDGRQWNSDNKYVSGGNSVTAKASFQDPSLLSEVPYMTARIFTSETTYKLPILPDKRYWLRLHFYPSVYNNFNPADSYFSVTANGVTLLNNFSSFITCQALSQAYIDREYALAPLNSDVLELKFKPSDKQDGAFAFVNGIQLIQMPDLLFDSPPLVGYPGQTVDAKGMHMQTMFRLNVGGQFISPVQDSGLSRTWYDDTPYIYGAATGVTLHAEKNVTIDYQAMPKYVAPTDVYSTSRSMGSNKDVNMGFNLTWIFQVDPNSMYLTRLHFCDYLDTLSNEVVFSIFVNNQTAEDQADVIGWTGSQGVATYKDYVVYVHEEPGADQLWLALHPNPATTPRYYDSMLNGVEIFKLNDTNLSGPNPQLSDMMMEYEERFRNFEDKNGHRKNFAIGGAAGGAAGFALVAAICIAVHQRKKRTPGSYTNTTSSWLPLYGNSHTGTKSTSGKSTMGSGANLAMAQGLCRYFSLQEMRQATKNFEESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGEEMCLVYDYMSHGTMREHLYKGNKPIDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPDMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALMPSLPKEQVSLADWALTNKRKGTLEDIIDPNLKGKIKPESLNKFADTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENDGTSSSNHNNAAHMDESEFDEVNLNQRDDMAAHYKNLSLGSEHDPSHDSTGNSAAIFSQIGNPKGR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03365 867 Gene3D Phosphorylase Kinase; domain 1 481 595 - -
Tsu01g03365 867 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 854 - -
Tsu01g03365 867 SUPERFAMILY Protein kinase-like (PK-like) 500 795 IPR011009 -
Tsu01g03365 867 Gene3D Transferase(Phosphotransferase) domain 1 596 821 - -
Tsu01g03365 867 Pfam Malectin-like domain 33 395 IPR024788 -
Tsu01g03365 867 Gene3D - 32 189 - -
Tsu01g03365 867 Gene3D - 211 396 - -
Tsu01g03365 867 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03365 867 MobiDBLite consensus disorder prediction 839 867 - -
Tsu01g03365 867 CDD STKc_IRAK 526 793 - -
Tsu01g03365 867 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Tsu01g03365 867 MobiDBLite consensus disorder prediction 844 860 - -
Tsu01g03365 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Tsu01g03365 867 Pfam Protein tyrosine and serine/threonine kinase 523 788 IPR001245 GO:0004672|GO:0006468
Tsu01g03365 867 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03365 867 PANTHER OS07G0166700 PROTEIN 21 854 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03365 Tsu-Chr1 41630516 41633512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03365 13 867 Receptor kinase-like Gene Family AT3G51550 52.649 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu01g03365 Malectin_like 9.1e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03365 - - gmx:100791236 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04586 07 50557746 50560878 Tsu01g03365 01 41630516 41633512 PCT