Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03346 ATGACATCATCAGTTCTTTCCAGTGATAGTATGCACATTGGACTTATTGCAGCTGCAGCCCATGCTGCAGCAACTAATAGCTGTTTTACAGGGTTCTTTAATCCAAGGGCTAGTTCATCTGAGTTTGTCATACCACTTTCAAAGTATATAAAAGCTGTGTACCATACACGTGTTTCTGTTGGCATGCGCTTCAGGATGCTTTTTGAAACTGAAGAATCAAGTGTGCGCAGGTACATGGATCTGTTAAGGTCTGTTGGGATGAATCAACAGCTGGGGAGAGACAACCACGGGCTGGTGCTTTGCAGAATGCTACAGCGGCTGAGCCTGGCAGAACCTGCGATTGCTTTGGGTCTGATACAGGCGGGTGCTTTGCAAAATGCCACAGCGGCTGAGGCTGGTGCATATTTGGCTGCTGTTAATTGGAAAATCCGACTACAGGCAGAACCTGCGATTGCTTTGGGTCTGATACGTGCTGGTGCTTTGCAGAATGCTACGGCGACTGAGCCTTGTGTGGCACTAATTGGTGAAGTAAACTCACTCCAAAATTTTGTtggataa 558 0.4642 MTSSVLSSDSMHIGLIAAAAHAAATNSCFTGFFNPRASSSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMDLLRSVGMNQQLGRDNHGLVLCRMLQRLSLAEPAIALGLIQAGALQNATAAEAGAYLAAVNWKIRLQAEPAIALGLIRAGALQNATATEPCVALIGEVNSLQNFVG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03346 185 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 86 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tsu01g03346 185 Pfam Auxin response factor 19 88 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Tsu01g03346 185 Gene3D - 57 101 - -
Tsu01g03346 185 PANTHER AUXIN RESPONSE FACTOR 8-LIKE 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03346 Tsu-Chr1 41410501 41414937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03346 3 85 B3 DNA Binding Superfamily AT5G37020 83.133 3.92e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03346 - - sly:100301945 144.436