Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03337 ATGAATATTTTCCAATATTCCACCACTATCTTCTTCATTAGTATCACTTTCTTGCTCTTGCTACcttcttcaaaatcaatttcCAATTACAACACATTGGTATACAAAACATGTTCAACACAAACCTTCAACACTCAATCTTATTCTCAATCACTCAATTCGCTTTTCCAACGACTCATAACACGATCCTCCAAAGACAAATTCTTCAAAACCAACGAAGCTATCGACGACCACACCTTCATCTCCGGCTTTTTTCAATGTAGAAACGACATCAACAACGAAGATTGTTTCACATGTGTAACAACATCTTTACTTCCTCATATATCAAACACCTTGTGTAACGATTCCACGTCAGCACGATTACAACTTCAAGGTTGCTACGTTCAATATCAAACGGAACAATTTCAAGAAAAAACTATTCGCGAATCCAAAAACAACGATATATTCCACAAGATTTGTCGAGTACCTATTGTAGAGTATTATGTTGAGTTTAAAGAGTTGATGGAAGAAGCATTTATGATACTTGAAAATGGGATTATAAATAGTGATGGGTTTTATgcaatgaattataaaaaagtgaaattgaTGGCACAGTGTGAAGGTGGTTTGAGAACTTGTGATTGTAGTGAATGTGTTAGTGATGCAGTGATGGTTGCAAAGGAAGAATGTGGTAATTCAGCTTCGGTAGAAATATATTTTGACAAGTGTTATATAAGCTATACATTTATGCTCAAATCAGGTAATGGTGATGATGAAAGCTATGTTCCAGGGGCAAGCAGAAACAACAACAGTCAAAAGTCCCAAAAATTGATAGCAATAATAGTTGGAGGAGCTGCAACTCTGTTTTTGGGTCTTATATTTGTTTCACTAGCAGACGTTCCTTTTCTAGAAGAGCAAAGAGATAATCCAGTTTTTCCCCTCCAGGAAAAAAGATCAACTATTGTGACATATAAAGTTCAAGTTGATAGCAAGGACTGGTTTATTAATGCCTTTAATGCTATGGAGACCTTAGGAATCTCTAAGGAAGAGGTGAAACCAGTGTTGAGAAACTTGTTGGAACTGTTTGATGAAAACTGGGAGCTTATTGAAGATGATAACTATCGGGCACTTATAGATGCATACTTTGAGTCAAAGGAAGATAAGCAAGAAGAACATAAGAGAAAAGCTCCAATAAGTTGTCATGATAATCAAAGACCAAAACAGAAACGTCACTTAGACAACCAGGTTTCATCAGCTGACAACTCAAGACGAGTGTTATCTGTAGAAGAGACTGGCATACCTCCAAAGACTGTTAAACAGGAAACTATGAAACCATCACAAATTTCCAGGCAAGATATGAAGTCCGCAACTAGTTCACATCAGAGAAGGTTGAGTGACGAAAAAAGGATCTCAAGTTTACCTTACATGACTGCTAGAGATAGAAAAAGTTATCTTGTGGCAGCACCATCTGCAGGGCATCATGAAGACCCAATTGATGAACCTAGCAATCCTTGTATTCAGAGGAAAAATATGTCAAGTGATCACTATCAGAAGAAGCTTATAACATCAGGAACTGAGAAACCTAAGTTTCAATCTGTTTCGACAAGTTACAATGGTTTGCCTGATGCTTCAAATGGAAATCATTCTATCAAATCCCTCACAGAGGTCTATCAGAATACACACAAGATAGAAGATGGGCCAACATGCAATAATAACACCAGAACCAGTAAGGGTAATATTGATATCGCTTCTTCACCCTTGGGAGAAgttaaaatttctttaaattgtGATGCTGCATTCAGACAACCAAATTTCCATATTCCTAATTTGGATCGTGTTATGAAATATGTGGAGGAGAAATACCTGAGGACTTTCAAGACTGTTGAGCCCCAACTATCGGTGGCAAAGCTATTAGACGATTTATGCAGAAGTGTTTTGAAGATGGGCTCGAATTTGAATCGAAAGGGGTCAAAGCAAGCTCCTGCTGAGGATAAAAAGAAAACCTTTCGATATGTCGATGACATAACAAAAGGTTcagaaaatgttaaaatatcattattaGATGAAACTGACAGTGAGGGTTTTCCGAAGTTTAATTACATTCCATCTAATATAATGTATCAAAATGCTAATGTCAACATTGCACTTGCTCGGATTGCGGATCAAGGTTGCTGTGCTGGTTGTTCAGGCGACTGTCTTTCCTTACCATTTCCTTGTGCGTGCTCTCAAGACACTGGTGGGGAGTTTGCTTACTCATCACAAGGTTTGTTgaaagaaaagtttttaaaagatTGCATGTCTATGCTAATGGAACCTCAAGATCATCATTATGTGTACTGTAATGAATGCCCAATTGAGAGGTCTAAGAATGAGACCAAACCCGAACCATGCAAGGGACATCTGGTTAGGAAGTTTATAAAGGAGTGCTGGAGGAAATGTGGATGTGACATGAAGTGTGGAAATCGGGTAGTGCAACGGGGTATAAGCCGTAAATTGCAGGTGTTCTTGACTGAAGAAGGAAAGGGTTGGGGCGTTAGACCACTAGAAGATTTGCCCAAGGGATCCTTTGTATGTGAATACGCTGGGGAAATTTTAACAAATACAGAATTGTATGAAAGGATTGTACAAAGTACCGGCAATGACAGACATACATATCCTGTAACGCTTGATGCAGACTGGGGCTCAGAAGTGGGATTACAGGATGAAGAGGCATTATGCTTGGATGCAACACATAATGGGAATGTTGCAAGATTCATCAATCATAGATGCAATGATGCAAATCTGATAGATATTCCTGTTGAAGTGGAGACACCTGACCGCCACTATTATCATCTTGCACTCTTTACAAACAAAAATGTGAGTGCATACGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGATCATAACCATCCTATTAAAGCATTCAAATGTTGTTGTGGAAGCGCTTTCTGCCGTGATAAGAAACAAAAAGGAAGTAGATTTACAAAGGCTAAAAAACTCAAGCATACATATATAGAGTAG 3006 0.3726 MNIFQYSTTIFFISITFLLLLPSSKSISNYNTLVYKTCSTQTFNTQSYSQSLNSLFQRLITRSSKDKFFKTNEAIDDHTFISGFFQCRNDINNEDCFTCVTTSLLPHISNTLCNDSTSARLQLQGCYVQYQTEQFQEKTIRESKNNDIFHKICRVPIVEYYVEFKELMEEAFMILENGIINSDGFYAMNYKKVKLMAQCEGGLRTCDCSECVSDAVMVAKEECGNSASVEIYFDKCYISYTFMLKSGNGDDESYVPGASRNNNSQKSQKLIAIIVGGAATLFLGLIFVSLADVPFLEEQRDNPVFPLQEKRSTIVTYKVQVDSKDWFINAFNAMETLGISKEEVKPVLRNLLELFDENWELIEDDNYRALIDAYFESKEDKQEEHKRKAPISCHDNQRPKQKRHLDNQVSSADNSRRVLSVEETGIPPKTVKQETMKPSQISRQDMKSATSSHQRRLSDEKRISSLPYMTARDRKSYLVAAPSAGHHEDPIDEPSNPCIQRKNMSSDHYQKKLITSGTEKPKFQSVSTSYNGLPDASNGNHSIKSLTEVYQNTHKIEDGPTCNNNTRTSKGNIDIASSPLGEVKISLNCDAAFRQPNFHIPNLDRVMKYVEEKYLRTFKTVEPQLSVAKLLDDLCRSVLKMGSNLNRKGSKQAPAEDKKKTFRYVDDITKGSENVKISLLDETDSEGFPKFNYIPSNIMYQNANVNIALARIADQGCCAGCSGDCLSLPFPCACSQDTGGEFAYSSQGLLKEKFLKDCMSMLMEPQDHHYVYCNECPIERSKNETKPEPCKGHLVRKFIKECWRKCGCDMKCGNRVVQRGISRKLQVFLTEEGKGWGVRPLEDLPKGSFVCEYAGEILTNTELYERIVQSTGNDRHTYPVTLDADWGSEVGLQDEEALCLDATHNGNVARFINHRCNDANLIDIPVEVETPDRHYYHLALFTNKNVSAYEELTWDYGIDFDDHNHPIKAFKCCCGSAFCRDKKQKGSRFTKAKKLKHTYIE 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03337 1001 ProSiteProfiles Gnk2-homologous domain profile. 146 245 IPR002902 -
Tsu01g03337 1001 ProSiteProfiles Pre-SET domain profile. 721 820 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu01g03337 1001 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 298 995 IPR025776 -
Tsu01g03337 1001 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 327 995 - -
Tsu01g03337 1001 Pfam Pre-SET motif 668 815 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu01g03337 1001 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Tsu01g03337 1001 CDD SET_SETDB-like 689 957 - -
Tsu01g03337 1001 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 327 995 - -
Tsu01g03337 1001 SMART set_7 823 963 IPR001214 GO:0005515
Tsu01g03337 1001 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Tsu01g03337 1001 Pfam Salt stress response/antifungal 190 241 IPR002902 -
Tsu01g03337 1001 Pfam SET domain 835 957 IPR001214 GO:0005515
Tsu01g03337 1001 ProSiteProfiles SET domain profile. 823 957 IPR001214 GO:0005515
Tsu01g03337 1001 Gene3D - 152 243 IPR038408 -
Tsu01g03337 1001 Gene3D - 30 135 IPR038408 -
Tsu01g03337 1001 Pfam Ubiquitin-binding WIYLD domain 329 379 IPR018848 GO:0018024
Tsu01g03337 1001 SUPERFAMILY SET domain 674 980 IPR046341 -
Tsu01g03337 1001 Gene3D - 316 380 IPR043017 -
Tsu01g03337 1001 MobiDBLite consensus disorder prediction 381 410 - -
Tsu01g03337 1001 MobiDBLite consensus disorder prediction 381 460 - -
Tsu01g03337 1001 Gene3D SET domain 643 966 IPR046341 -
Tsu01g03337 1001 SMART preset_2 665 807 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu01g03337 1001 MobiDBLite consensus disorder prediction 433 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03337 Tsu-Chr1 41313801 41327525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03337 665 980 Su(var)3-9 homologs AT5G04940 26.786 2.09e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu01g03337 Pre-SET 5.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03337 - - gsj:114402909 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03337 01 41313801 41327525 Tsu01g03337 01 41313801 41327525 ECH