Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03321 ATGGAACAAGCAGTTTTGGATGACATAATCAATCGACTTCTTGAAGTTCGTAGCCGTCCGGGGAAGCAGGTCCAGTTGTCGGAGGCAGAGATCCGTCAACTATGTGGTGTTGCTAGAGAAATTTTCTTGCAGCAACCTAATTTATTGGAACTTGAAGCACCTATTAAGATTTGTGGCGACATACATGGTCAATATTCTGATCTTCTAAGGCTTTTTGAGTATGGTGGATTACCTCCTCAGGCCAACTACTTGTTTTTGGGTGATTATGTGGATCGAGGGAAGCAAAGTTTAGAAACAATATGCCTTCTCCTAgcgtataaaataaaatatccagagaatttttttcttttaagggGAAACCACGAATGTGCTTCTATTAACCGTATTTATGGATTTTATGATGAGTGTAAAAGAAGGTTCAATGTAAGGATATGGAAGGTGTTTACGGAATGCTTCAATTGCCTACCTGTGGCAGCTCTCATTGATGAAAAGATTTTGTGCATGCATGGCGGACTTTCTCCTGACTTAAATAGTTTGGATCAGATTAGAAATCTAAAGCGGCCGACTGATGTGCCTGATACAGGTTTGCTTTGCGATCTCCTATGGTCAGACCCTAGCAAAGAAGTACCGGGCTGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCAGAGTTTCTTCAGAAACATGATTTGGATCTTATTTGTCGAGCTCATCAGGTGGTGGAGGATGGATATGAGTTCTTTGCTAACCGGCAGCTTGTAACGATATTTTCGGCGCCTAATTACTGTGGGGAGTTTGACAATGCTGGTGCCATGATGAGTGTTGATGAGACACTAATGTGCTCTTTCCAAATATTAAAGCCAgctgataaaaaaacaaagctcAATTTCGGAAGTACAACCACTACTAAACCAGGAAACTCTCCGGCAGGTGTAAAGGTAGGAAGATAG 969 0.3963 MEQAVLDDIINRLLEVRSRPGKQVQLSEAEIRQLCGVAREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRIWKVFTECFNCLPVAALIDEKILCMHGGLSPDLNSLDQIRNLKRPTDVPDTGLLCDLLWSDPSKEVPGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKTKLNFGSTTTTKPGNSPAGVKVGR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03321 322 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 319 - -
Tsu01g03321 322 MobiDBLite consensus disorder prediction 302 322 - -
Tsu01g03321 322 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Tsu01g03321 322 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Tsu01g03321 322 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Tsu01g03321 322 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Tsu01g03321 322 SUPERFAMILY Metallo-dependent phosphatases 16 299 IPR029052 -
Tsu01g03321 322 Gene3D - 1 305 IPR029052 -
Tsu01g03321 322 SMART pp2a_7 26 296 IPR006186 GO:0016787
Tsu01g03321 322 CDD MPP_PP1_PPKL 5 294 - -
Tsu01g03321 322 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03321 Tsu-Chr1 41085683 41093288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03321 37 239 Calmodulin-binding Proteins AT5G63870 32.787 5.88e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03321 K06269 - gmx:100799218 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03321 01 41085683 41093288 Tsu01g03321 01 41085683 41093288 ECH