Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03302 ATGGCTTCTCCCTCTTGCTCCGCCACAGACCTCGCCCCACTCCTCACTGCCGCCGCAAACGCAACTGCTGTGGCAAACTATCTCTGCACTCAATTTGATGCCATCTCTAAAAAGTTCAGTGATACCACCTATGCAATAGACAACACCTACCTTCTTTTCTCAGCTTATTTAGTCTTCGCCATGCAGCTTGGTTTCGCCATGCTCTGTGCCGGCTCTGTTCGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTTGATGCCGCTGCCGGTGGCCTTTCCTATTACCTTTTCGGCTTTGCTTTCGCATTTGGAGCACCCTCCAACGGCTTCATTGGCCGCCACTTTTTCGGCTTAAGGGATTACCCTTCGCCCTCCGGAGACTACAGCTTTTTCCTCTACCAATGGGCTTTCGCCATCGCCGCTGCAGGCATCACCAGTGGCTCTATTGCAGAGAGAACACAGTTTGTTGCATATCTTATATATTCTTCTTTCTTAACCGGTTTTGTTTATCCCATTGTTTCGCATTGGGTTTGGTCCGCTGATGGGTGGGCCAGCCCAACGCGAACCCATGGTGATGTTTTATTCGGGTCCGGGGTAATTGACTTTGCCGGTTCAGGCGTGGTTCACATGGTTGGTGGTATTGCAGGTTTATGGGGAGCATTTATAGAAGGTCCAAGAATCGGCCGCTTCGACCGGACCGGTCGGGTTGTTGCATTAAAAGGACACAGCGCGTCGTTGGTAGTGTTGGGTTCATTTTTATTATGGTTCGGATGGTATGGGTTCAATCCCGGTTCATTTTTAACAATTGTAAAAGGTTACGGCAATAACAAAGGAGATTATTACGGTCAATGGAGTGCGATTGGAAGGACAGCTGTCACAACAACATTGGCTGGATGCACTGCGGCTTTAACAACTTTGTTTAGTAAACGGTTATTGGTTGGACACTGGAATGTGACTGACGTGTGTAATGGTTTACTTGGCGGTTTTGCTGCGATAACTTCGGGCTGTTCTGTTGTAGAACCATGGGCCGCGATTGTGTGTGGGTTCATTGCGGCGTGGGTTTTGATTGGACTTAATAAACTAGCGGTTAAGGTGAAGTATGATGATCCTTTAGAGGCGGCCCAATTACACGGAGGGTGTGGCGCGTGGGGGGTGTTGTTTACAGGATTGTTTGCAAAAGGGGAGTATGTTCACGAGATTTACGGGATTGGGAGGCCATATGGATTGTTGATGGGTGGTGGAGGGAAGTTGTTTGCGGCGCAAGTAGTTGAGGTGTTGGTGGTATGTGTGTGGGTTACGGTGACAATGGCACCATTATTTTATGGGCTGAATAAGATGAAATTGTTGAGGATTTCAAGGGACGATGAAACTGCAGGGATGGATTTGACGAGACATGGTGGGTTTGCTTATGCGTataatgatgaagatgatgatgagtcGATCAggaaattagggtttatgatGGGTAGAATTGAACCCGCCGGGAGTGTAACTCCCTCCGCTGCCGGACATGATTCACAGATGCCAACCACTGCTCCACCAGTGTGA 1554 0.4762 MASPSCSATDLAPLLTAAANATAVANYLCTQFDAISKKFSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTHGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRVVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKGYGNNKGDYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIVCGFIAAWVLIGLNKLAVKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVHEIYGIGRPYGLLMGGGGKLFAAQVVEVLVVCVWVTVTMAPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYNDEDDDESIRKLGFMMGRIEPAGSVTPSAAGHDSQMPTTAPPV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03302 517 MobiDBLite consensus disorder prediction 497 517 - -
Tsu01g03302 517 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tsu01g03302 517 PANTHER AMMONIUM TRANSPORTER 3 505 - -
Tsu01g03302 517 PANTHER AMMONIUM TRANSPORTER 3 505 - -
Tsu01g03302 517 SUPERFAMILY Ammonium transporter 44 453 - -
Tsu01g03302 517 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tsu01g03302 517 Gene3D Ammonium transporter AmtB like domains 24 489 IPR029020 -
Tsu01g03302 517 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03302 Tsu-Chr1 40915386 40917350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03302 2 502 Inorganic Solute Cotransporters AT1G64780 77.362 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03302 K03320 K07573 gmx:100797209 800.816