Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03290 ATGGAGAAAAATGTATTTGCATTGTTTGTGATGTTGTTGATATTTGCTCTTGTTTTCTCTCTATCTGAAGAGCTTAATGCAGATGGAAAATATCTTATGGATATAAAAATGAGATTGTTTGATAAACACAATCATCTTGAGAATTGGAATTCAAGTGATTCAACACCTTGTGGTTGGAAAGGTGTCATCTGCAACAATGACATCAATCCAATGGTTGAATCTCTTGACTTGCATGCAATGAATCTCTCTGGCTCTTTGTCTTCTAGCATTGGTGGTTTGGTTCATTTGCTTCACCTTAACTTGTCTCAAAACACTTTCTCTGGTTTTATACCAAAGGAAATTGGAAACTGTTCAAGTTTGCAAGTTCTTAGTCTCAATATAAATGAGTTTGAAGGTCAAATTCCTGTCGAAATAGGTCGGCTTTCGAAGTTAACCGAATTGCATCTTTCCAATAACCAGCTCTCAGGACCTTTACCAGATGAAATTGGTAACCTTTCTTCACTCTCAATACTTACTCTTTACACAAATCATCTTAGTGGATCTTTTCCGCGTTCTATCGGGAACCTTAAAAGATTGATTCGGTTTCGAGCCGGACAGAATATGATCTCCGGAAGTTTACCTCAAGAGATAGGTGGATGTGAGAGTTTGGAGTATCTTGGTTTAACTCAAAATCAGATAAGTGGTGAAATACCAAAAGAACTTGGTTTACTCAAGAACTTGCAATGCTTGGTCTTAAGGGAAAATAGTCTTCATGGTGCTATACCTAAAGAGCTTGGAAACTGTACTAATTTGGAGGTTCTTGCTCTTTATCAGAACAATCTTGTGGAAGAAATTCCAAAGGAGCTTGGAAAACTTGAAGCCCTAAAGAGACTATACCTTTACAGAAATGAGTTGACAGGAAATATTCCAAGGGAAATTGGAAATCTTTCTGTTGCAATTGAGATTGATTTTTCGGAGAATCTTCTAACAGGAGAGATACCGATCGAGTTGGTTAATATAAAAGGGTTGCAATTGCTTCATCTCTTCGAGAACAAGTTAACCGGCGCGATTCCAAATGAGTTCACCACATTGAAAAATCTAACTGAGTTGGATCTCTCTATTAATCATCTCAATGGTACTATCCCTATTGGATTTCAGGATTTTACCAAACTTACCTCTTTGCAACTCTTCAACAACTCATTAAGTGGTAGAATTCCTTATGCACTTGGAGCAAACAGTCGACTTTGGGTGCTCGATTTGTCATTCAACTTTTTGGTTGGAAGAATTCCAATTCATCTTTGTCAACTGTCTAACTTGATGATGTTGAACTTAGGATCAAACAAACTCGCCAGAAATGTACCTTATGGAATTACAACCTGCAAGTCTTTGGTGTATCTTCGCCTCTTCGGTAATAACTTGAGGGGCAAGTTTCCTTCTAATCTATGCAAGCTGGTCAATCTTTCTACAGTTGAGTTGGATCAGAATCAATTCACAGGTCCTATTCCTCCACAAGTTGGTTACTTCAAAAAGTTACAAAGACTTCATCTTTCTAACAACCATTTTTCATCCGAGTTGCCGAAAGAAATTGCTAACCTCTCTCAGTTGGTCTCCTTTAATGTCTCATCAAACTATCTTTCTGGTAGAGTGCCTGTGGAACTTTTCAAATGCAGGAAGCTCCAAAGACTTGATCTCAGCGGCAACGACTTTGCAGGTACTTTATCAGGTGAGATAGGAACTCTTTCACAATTAGAGCTTCTCAGGCTCTCACATAACAACTTTTCTGGTAATATTCCCTTGGAAATCGGAAAACTCTTGCGGTTGACCGAGCTACAAATGAGCGAAAACTCATTTTGTGGTTACATTCCACAACAATTAGGTTCCCTCTCATCCTTACAAATTGCACTGAATCTCAGCTATAATAAACTTTCAGGCCAAATACCTTCTCAACTTGGGAATCTTATTATGCTAGAATCCCTCCAACTCAATAACAACCATTTAAGTGGCGAAATTCCAAACTCCTTTAACAGTCTTTCAAGTTTACTTTCCTTCAATTTCTCATACAATGATCTTATAGGCCCTTTACCTTCTTTACCTCTCTTGCAAAACTCCACATTCAGCTGCTTTTTAGGTAACAAAGGACTATGTGGAGGACACCTTGTCCCTTGTCCAAATTCACCTTCACATTCCCCTCCAAATAAACTTGGAAAAATTCTAGCTATAGTTGCAGCTATTGTTAGTGGAATTTCATTGGTTTTAATTCTAGCTATTATATATCTCATGAGAAATTTCACTGTGCCACAACAAGTCATAGATAAACCAAATTCTCCAAATGTTTCAAACATGTACTTTTTTCCAAAAGAGGACTTGAATTTCCAAGACATGGTTGAAGCTACTGAAAATTTTCATTCCAAATATGAAATTGGAAAAGGTGGTAGTGGAACTGTGTATAGAGCAGATATTTCAACTGATGATCAAACAAATATGAAAACAATTGCTATAAAGAAGTTGACATCAAACAGTCACAGCATTGATGTAAATGGCTGCTTCCGCGCTGAAATCTTAACTTTGGGAAAAATAAGGCATAGAAATATTGTGAAATTATATGGTTTCTGCAACTATAGTGGCTCAAATATGCTACTTTATGAGTACATGGAAAAGGGTAGTTTAGGAGAGTTACTTCATGGAGAATCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTCAGATTGCACTTGGAACTGCACAAGGACTCTCTTATTTGCACCATGATTGTAAGCCTAGGATTATTCACCGCGACATTAAGTCCAATAACATACTTATTGATCATGAATTTGAAGCTCATGTTGGTGATTTTGGTTTGGCTAAGCTAATTGATATCTCAAAGTCTAAATCAATGTCTGCAGTTGTTGGTTCTTATGGCTACATTGCCCCTGAGTATGCATACACAATGAAAGTCACAGAAAAATGTGATGTCTACAGCTATGGAGTAGTCCTATTAGAGTTACTAACAGGCAAGAAACCAGTCCAATCATTAGATCAAGGTGGTGGTGATCTTGTAACATTGGTCACAAATCATATCAACAAATATTCATTGAAATTAGACATCATTGATACAAAATTGGACCTACTACATGAAATTGATGTTGCACAAATATTTGATGTCTTAAAAATTGCATTACTATGCACTGACACATCTCCTTCTAGAAGACCAAGTATGCGTAAAGTTGTTGCAATGCTTACAAGTTCTAGTAAAAGGAAAGAACAATCTTCATTCTCACCATGTCATGAATCAAGTAACATAGAAGAATGA 3288 0.3698 MEKNVFALFVMLLIFALVFSLSEELNADGKYLMDIKMRLFDKHNHLENWNSSDSTPCGWKGVICNNDINPMVESLDLHAMNLSGSLSSSIGGLVHLLHLNLSQNTFSGFIPKEIGNCSSLQVLSLNINEFEGQIPVEIGRLSKLTELHLSNNQLSGPLPDEIGNLSSLSILTLYTNHLSGSFPRSIGNLKRLIRFRAGQNMISGSLPQEIGGCESLEYLGLTQNQISGEIPKELGLLKNLQCLVLRENSLHGAIPKELGNCTNLEVLALYQNNLVEEIPKELGKLEALKRLYLYRNELTGNIPREIGNLSVAIEIDFSENLLTGEIPIELVNIKGLQLLHLFENKLTGAIPNEFTTLKNLTELDLSINHLNGTIPIGFQDFTKLTSLQLFNNSLSGRIPYALGANSRLWVLDLSFNFLVGRIPIHLCQLSNLMMLNLGSNKLARNVPYGITTCKSLVYLRLFGNNLRGKFPSNLCKLVNLSTVELDQNQFTGPIPPQVGYFKKLQRLHLSNNHFSSELPKEIANLSQLVSFNVSSNYLSGRVPVELFKCRKLQRLDLSGNDFAGTLSGEIGTLSQLELLRLSHNNFSGNIPLEIGKLLRLTELQMSENSFCGYIPQQLGSLSSLQIALNLSYNKLSGQIPSQLGNLIMLESLQLNNNHLSGEIPNSFNSLSSLLSFNFSYNDLIGPLPSLPLLQNSTFSCFLGNKGLCGGHLVPCPNSPSHSPPNKLGKILAIVAAIVSGISLVLILAIIYLMRNFTVPQQVIDKPNSPNVSNMYFFPKEDLNFQDMVEATENFHSKYEIGKGGSGTVYRADISTDDQTNMKTIAIKKLTSNSHSIDVNGCFRAEILTLGKIRHRNIVKLYGFCNYSGSNMLLYEYMEKGSLGELLHGESSSSLDWYSRFQIALGTAQGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISKSKSMSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPVQSLDQGGGDLVTLVTNHINKYSLKLDIIDTKLDLLHEIDVAQIFDVLKIALLCTDTSPSRRPSMRKVVAMLTSSSKRKEQSSFSPCHESSNIEE 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03290 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Tsu01g03290 1095 ProSiteProfiles Protein kinase domain profile. 794 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03290 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1084 - -
Tsu01g03290 1095 Gene3D Transferase(Phosphotransferase) domain 1 877 1092 - -
Tsu01g03290 1095 Gene3D Ribonuclease Inhibitor 178 422 IPR032675 -
Tsu01g03290 1095 Gene3D Ribonuclease Inhibitor 423 719 IPR032675 -
Tsu01g03290 1095 PANTHER LRR RECEPTOR-LIKE KINASE 8 1084 - -
Tsu01g03290 1095 ProSitePatterns Protein kinases ATP-binding region signature. 800 828 IPR017441 GO:0005524
Tsu01g03290 1095 Gene3D Ribonuclease Inhibitor 24 177 IPR032675 -
Tsu01g03290 1095 Gene3D Phosphorylase Kinase; domain 1 759 876 - -
Tsu01g03290 1095 Pfam Leucine rich repeat 335 394 IPR001611 GO:0005515
Tsu01g03290 1095 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Tsu01g03290 1095 SUPERFAMILY L domain-like 378 717 - -
Tsu01g03290 1095 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Tsu01g03290 1095 SUPERFAMILY RNI-like 74 408 - -
Tsu01g03290 1095 SMART serkin_6 794 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03290 1095 Pfam Protein kinase domain 794 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03290 1095 SMART LRR_typ_2 381 405 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 646 669 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 237 261 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 141 165 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 525 549 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 285 309 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 501 524 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 357 380 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 93 117 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 573 597 IPR003591 -
Tsu01g03290 1095 SMART LRR_typ_2 429 453 IPR003591 -
Tsu01g03290 1095 SUPERFAMILY Protein kinase-like (PK-like) 768 1072 IPR011009 -
Tsu01g03290 1095 MobiDBLite consensus disorder prediction 1073 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03290 Tsu-Chr1 40786074 40790019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03290 19 1072 Receptor kinase-like Gene Family AT5G56040 37.523 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu01g03290 Pkinase 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03290 - - adu:107465566 1467.6