Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03267 ATGAATTGCTTTCCGTGTTGTGGTCctcaaaaaaataagaagagtgaTAGTATGAAAGAGGATGATGATTCTCCCACACAACAAGAAATCAATTCTGCAGCAAAGGCTCccgATATGAAGAAACAAAGGGGGGATGAGCAAATCCAAGGAGACCCGAATAACATTAATGCACATAATTACACTTTTCGTGAGCTTGCAACAGCAACGAAGAATTTTCGACAGGAATGTCTCCTTGGTGAAGGAGGATTTGGAAGAGTTTACAAAGGGGTTATTCCTGCAACTGGACAgGTTGTGGCCGTGAAGCAACTCGACAGACATGCGATGGAAAACAGCAAGGATTTTCTATCTGAAGTTTCTCTGCTGAGTCATGTTCACCATGAGAATCTTGTCAATCTCATTGGTTATTGTGCTGATGGCGATCAACGTCTTTTGGTTTATGAATACTTTCCTGGCACTAATCTTGAAGCACGTCTTCTTGAGAATAAAAAGGATGAAACACCATTAAATTGGTATGAAAGAATGAAAGTAGCAGCAGGAGCATCTAAAGGACTAGAACACTTGCACGACAGCGCCAATCCCCCGATTATATACCGTGACTTGAAAGCAGCCAACATCTTATTGGATGGTGATCTTAATACGAAACTATATGATTTCGGAATGGCAAAACTTTGTGGTGGAGACAACAAGATGAACCATGCACCTCCAAGAGTTATGGGTACATATGGTTATTGTGCTCCTGAATATACAAGAACAGGTCAATTCTCCTTGAAATCAGATGTATATAGTTTTGGAGTTGTCATGCTTGAACTTATCACTGGTCGACGTGCCATCGACACCACAAGATCTAACGAAGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGGGACCCAAAAAAATATCCAGAAATGGCAGATCCACTTCTGAATAAACATTTTCCAGAAAAGGATCTCAATCAAGCTGTTGCAATAGTAGCAATGTGCTTACAAGAGGAACCAGAAGCTCGTCCTTACATCAGTGACGTTGTAACTGCTCTTAGTTTTCTTTCAACAGTTCCAGCGCAACCTATTCCACCACCCTTGCGCCCCGCTGCTACCTCTGTCTCTAAGCATAGTGTTGCTACTGAAAGCGAATACGATAGTGAGACTGGAAGTGAATCAGAAGGAGAAACTTCAGATGATACAGCAAGTTCAAAAAGCAAAGAAAATGATGTCTCAAGCCAATCTAAAAAAAGGGTGTCATCGAAGAAAGCAAGCCGAAAAAGCAGCACAAGATCAAGGAGTAAAACAAGCAGTAAAGATTCAGCAGATGAAAGTGCTTCTTCAAGTGGCAAAAGCAGTAAAAAATGGCAAAGCTTTGTTGGTAATATAAGCCAAAAGACTAACAAATCAATAAGATCTTCTATCAAAGAATTAAGCCAGAAGAGCAGTAGAAAATCTTCAAGCAAAGAAAAAGGCCAGAAAAGCAGTAGGAAGTCTTCTAGAAGAGGTTTAAGTTCAAAATCTTCTGCTAGAGTTTCGGAAGATGAAAGCGCGATTTCATCTCATAGAACTGCCTCATCAAGCCAATATACAATATCTGATCGTAGCAGCAGCAGAGGAAGTGGAAGTGTTTGCTCGGACATTAACGGTAGCAGAAGGATAGAACAAAACAGTGAATAA 1665 0.4 MNCFPCCGPQKNKKSDSMKEDDDSPTQQEINSAAKAPDMKKQRGDEQIQGDPNNINAHNYTFRELATATKNFRQECLLGEGGFGRVYKGVIPATGQVVAVKQLDRHAMENSKDFLSEVSLLSHVHHENLVNLIGYCADGDQRLLVYEYFPGTNLEARLLENKKDETPLNWYERMKVAAGASKGLEHLHDSANPPIIYRDLKAANILLDGDLNTKLYDFGMAKLCGGDNKMNHAPPRVMGTYGYCAPEYTRTGQFSLKSDVYSFGVVMLELITGRRAIDTTRSNEEQNLVSWAQPLFRDPKKYPEMADPLLNKHFPEKDLNQAVAIVAMCLQEEPEARPYISDVVTALSFLSTVPAQPIPPPLRPAATSVSKHSVATESEYDSETGSESEGETSDDTASSKSKENDVSSQSKKRVSSKKASRKSSTRSRSKTSSKDSADESASSSGKSSKKWQSFVGNISQKTNKSIRSSIKELSQKSSRKSSSKEKGQKSSRKSSRRGLSSKSSARVSEDESAISSHRTASSSQYTISDRSSSRGSGSVCSDINGSRRIEQNSE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03267 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Tsu01g03267 554 MobiDBLite consensus disorder prediction 436 472 - -
Tsu01g03267 554 PANTHER OS07G0668900 PROTEIN 1 432 - -
Tsu01g03267 554 MobiDBLite consensus disorder prediction 497 554 - -
Tsu01g03267 554 SUPERFAMILY Protein kinase-like (PK-like) 55 371 IPR011009 -
Tsu01g03267 554 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Tsu01g03267 554 Gene3D Phosphorylase Kinase; domain 1 43 148 - -
Tsu01g03267 554 SMART serkin_6 72 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03267 554 Pfam Protein kinase domain 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03267 554 PANTHER RECEPTOR-LIKE KINASE LIP1 1 432 - -
Tsu01g03267 554 MobiDBLite consensus disorder prediction 355 554 - -
Tsu01g03267 554 MobiDBLite consensus disorder prediction 473 489 - -
Tsu01g03267 554 MobiDBLite consensus disorder prediction 1 56 - -
Tsu01g03267 554 CDD STKc_IRAK 78 347 - -
Tsu01g03267 554 Gene3D Transferase(Phosphotransferase) domain 1 151 355 - -
Tsu01g03267 554 ProSiteProfiles Protein kinase domain profile. 72 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03267 554 MobiDBLite consensus disorder prediction 393 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03267 Tsu-Chr1 40493886 40497062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03267 1 424 Glycoside Hydrolase AT3G07070 53.118 1.58e-154 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu01g03267 Pkinase 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03267 - - lang:109335196 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03267 01 40493886 40497062 Tsu01g03267 01 40493886 40497062 ECH