Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03250 ATGACAATAGTTACAACACCTAGTGTTGGTATGAAATTTGATAATGTAAATGAAGCATGGAAATTTTGGGCTGCCTATGGTAAAGAAAAAGGCTTTGGAGTTAGAAAACAATACTCCAACAAAAAGAAGGACGGCTCTATTAGATCGTGCAGATTCGTTTGTTGTAAAGAGGGTCATCGAACAAAGAATCTGAAATCCCTTTTGGCGAAGAATCCTAAAGTTGAGACAAGAACTGATTGCGAAGCGAGAATTGCACTTAGTAGAAAGGATGAAAAGTTTGTAATCCACGAGTTCGTAGAAGCTCATAACCACCCTTTGCAGATTCCAGAAACAACACATATGTTAGCCTCACATCGTAAAATATCTGAAGTTCAAGCATATGAGATTGAAATGGCAGAAGACTCCGGATTGATGCAAAAGGCCTCATTTCAGCTCATGAGTGCACATGTTGGAGATGCAAGAATGATTTTAGACTATGAATATTTTGGTGATGTGGTTTCTTTGGATACAACATATTGTACCAATGGTGCTAATCGACCGTTGGCATTATTTTCGGGTTTCAACCATCACAGAGGTACCGTCATTTTTGGGTCTCGACACAAACTACCAAAGCTAAGGTATAACTATTCATCAATTCTGATGCAACTTGCACAAATATACACTCCTACAGTTTTTGAGGTGTTTGAGGCAAATGATGTTAAATTTGTCTCTGAGAAATACATTCTAAAGAGGTGGATAAAGGATGCACGAAGTGGTATAATACATGACATACATGCTAATGAAGTTGTGGAAAATCCCAAACTATCTATTGCACAACGATATAGACAACTTTGCTCCATTATGATTAAATTTGCTGTTGATGTGTCCTATTCTGAGAGTTTATCTCAGCTTGCAAAAGAAGGATTGCAGGACTTATATAAGAAGGTGATGGATGCTCGGTTAAAAGAAAATTCAACATGTAATGATCAAGGTGATGTTCCAATACCAACGACAGTGTATGTCACAGAAGCAAGCGGGTTCAAGCAACGACCTGGGTTAAAAAGACAGAAAAGATTGAAGAGCTGCCTTGAACTTTCGCGCCagaaaaaaaaggcaaaaaccAACTATAAAACCTTCTTCAACGCAACAATCTAA 1134 0.3739 MTIVTTPSVGMKFDNVNEAWKFWAAYGKEKGFGVRKQYSNKKKDGSIRSCRFVCCKEGHRTKNLKSLLAKNPKVETRTDCEARIALSRKDEKFVIHEFVEAHNHPLQIPETTHMLASHRKISEVQAYEIEMAEDSGLMQKASFQLMSAHVGDARMILDYEYFGDVVSLDTTYCTNGANRPLALFSGFNHHRGTVIFGSRHKLPKLRYNYSSILMQLAQIYTPTVFEVFEANDVKFVSEKYILKRWIKDARSGIIHDIHANEVVENPKLSIAQRYRQLCSIMIKFAVDVSYSESLSQLAKEGLQDLYKKVMDARLKENSTCNDQGDVPIPTTVYVTEASGFKQRPGLKRQKRLKSCLELSRQKKKAKTNYKTFFNATI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03250 377 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Tsu01g03250 377 PANTHER OS03G0181600 PROTEIN 6 141 - -
Tsu01g03250 377 PANTHER OS03G0181600 PROTEIN 151 198 - -
Tsu01g03250 377 PANTHER OS03G0181600 PROTEIN 236 317 - -
Tsu01g03250 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 141 IPR031052 GO:0006355
Tsu01g03250 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 151 198 IPR031052 GO:0006355
Tsu01g03250 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 236 317 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03250 Tsu-Chr1 40284897 40286772 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g03250 FAR1 1.4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03250 - - cam:101507947 201.445