Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03215 ATGGGTTCGGGAAGCAGAAACTACTCTGCAAATCCGAACGATTACAGGCTTCTAGAAGAAGTCGGTTACGGTGCAAGCGCAACTGTTTATCACGCAATCTACATCCCTTACAACGAAGAAGTTGCAGTTAAATCTCTCGATCTAGATCGATGCAATTCAAATTTCGATGATATACGAAAAGAAGCACAGATCATGAGCTTAATTGATCATCGTAACGTTGTTAAATCTTATTGTTCATTCGTTGTGGATCGTAAACTTTGGGTGATTATGCCTTTTATGGCTCAAGGTTCTTGTTTACATCTAATGAAAACTGCTTATCCTGATGGATTTGAAGAAGATGCTATTGGATCGATTCTTAAAGAAACTCTTAAAGCTTTGGATTATTTACATCAACATGGTCACATTCATCGTGATGTTAAAGCTGGTAATATTTTACTTGATTCTAATGGTGAAGTCAAACTATCTGACTTTGGTGTTTCTGCTTCTATGTTTGATACCGGTGATCGTCAACGTTCTAGAAATACTTTTGTTGGTACTCCTTGCTGGATGGCGCCGGAGGTGCTACAACCTGGTACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGAATTACTGCACTTGAGTTGGCTCATGGTCATGCGCCGTTTTCTAAGTATCCTCCAATGAAGGTTTTACTCATGACCATACAAAATGCACCTCCTGGCCTTGATTACGATCGTGATAGAAAGTTCTCGAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCGTCTGTGGACAAGTTACTGAAACACTCCTTCTTCAAACAAGCTAAGCCTCCGGAACTTTCTGTGAAGAAATTATTTGCTGACTTACCGCCTCTTTGGACTCGTGTAAAAGCCCTTCAGCTTAAAGATGCAGCTCAACTAGCACTGAAGCGAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCGTGGAACTTTGACGTTGATGATTTGAAAGCTCAAGCTTCATTGGTGCAGGAAGATGAAGATATTGCAGAGGGAAAGGAAGAAGAGGAAAACAAGTTCTTCAGCTCCAGCAAGGATACAAGTGATTCCCAACTTAATGTGGAGAAGAGGAATTCGGATAACTCGCAACAAGCTGACTTCATGTTACAAGTAGGTGAAAATGATGTACCACAGAGTGATAAAAGAAATGGATCAATTGCTGAGGCAACAACATCTACTTCAGAGAAGGATGTGGGAACAGGCAAGATTAAAGCTCAGGCAGTCAAAGTTGGTAAAACCCAAAGTGGGCCGCTGGTGCCTGGCACAGTGCTTGGTCATTATTTACCCGAAAGAGGGCGTCTATTTGAAAGGTTTGAGAATGAAAGCCAGTTATCAGGTGAGAAAAGTAATCGGGATATGCGACGAGCTCCAAGCTTTAGTGGTCCATTGATGCTTCCTAATCGAGCTTCGGCAAATAGTTTGTCGGCCCCAATAAAATCCTCTGGAGGATTCAGAGATTCCTCAGATGATAAATCTAAGGCTAATCTAGTGCAAATTAAAGGGCGGTTCTCAGTGACATCAGAAAATTTAGATCTGGtgaagGATATTCCTGTAAGTTCTGTTTCACGCCGATCTCCACAGGATTCTTCACCACTGAGGAAATCTGCCAGTGTGGGTGATTGGATGTTGGATTTCAAACAACAAATGCCAATTGGACAGTCTTCCAATGATTCTGCCAACATGAATATTCCTACATCAGTTATTGTGCCTCACCTTCACAATCTTTTCCAGCAGACGTCTATTCAACAGGATCTTATAATGAGTCTGTTGAGTAGCTTGCAAACTTCTGAGGCAAATGATGCTTCTCAGAATGGAAAGATGCCGCCAATACCTCGCAGTCCAGAGAATAATGGCAGTGTTGATCCTAcagcttcagagagagaactaCATTTGCTGTCCAAAATTTCAGAACTTCAGTCTCGGATGATCAGTTTGACAGATGAACTTACTTCTGAGAAGTTGAAACACATGCAGTTGCAACAACAAGTAGCCGCTCACTACAGCCAGCAACAAAACGGGGAAAGAGAGGAAGGTGCATGA 2121 0.4121 MGSGSRNYSANPNDYRLLEEVGYGASATVYHAIYIPYNEEVAVKSLDLDRCNSNFDDIRKEAQIMSLIDHRNVVKSYCSFVVDRKLWVIMPFMAQGSCLHLMKTAYPDGFEEDAIGSILKETLKALDYLHQHGHIHRDVKAGNILLDSNGEVKLSDFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVDKLLKHSFFKQAKPPELSVKKLFADLPPLWTRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDVDDLKAQASLVQEDEDIAEGKEEEENKFFSSSKDTSDSQLNVEKRNSDNSQQADFMLQVGENDVPQSDKRNGSIAEATTSTSEKDVGTGKIKAQAVKVGKTQSGPLVPGTVLGHYLPERGRLFERFENESQLSGEKSNRDMRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSPQDSSPLRKSASVGDWMLDFKQQMPIGQSSNDSANMNIPTSVIVPHLHNLFQQTSIQQDLIMSLLSSLQTSEANDASQNGKMPPIPRSPENNGSVDPTASERELHLLSKISELQSRMISLTDELTSEKLKHMQLQQQVAAHYSQQQNGEREEGA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03215 706 CDD STKc_OSR1_SPAK 13 276 - -
Tsu01g03215 706 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 699 - -
Tsu01g03215 706 MobiDBLite consensus disorder prediction 624 653 - -
Tsu01g03215 706 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03215 706 MobiDBLite consensus disorder prediction 371 396 - -
Tsu01g03215 706 MobiDBLite consensus disorder prediction 353 427 - -
Tsu01g03215 706 SUPERFAMILY Protein kinase-like (PK-like) 12 326 IPR011009 -
Tsu01g03215 706 MobiDBLite consensus disorder prediction 686 706 - -
Tsu01g03215 706 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03215 706 MobiDBLite consensus disorder prediction 403 426 - -
Tsu01g03215 706 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03215 706 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Tsu01g03215 706 Gene3D Transferase(Phosphotransferase) domain 1 96 324 - -
Tsu01g03215 706 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Tsu01g03215 706 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03215 Tsu-Chr1 39728413 39737696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03215 8 698 MAP Kinase Kinase Kinase Kinase AT4G10730 64.714 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tsu01g03215 Pkinase 1.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03215 - - gmx:100783699 1134.4