Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03214 ATGGCCATTAAAAATTTCTTGGTTTCTCTCATGCTCATTACATTGCTCCAAATCCAAACCAAAGTTTTCTGTTTCCAATACCAAGTTGGAGATCTAAATGCTTGGGGTATACCCACCTCAACAAATTCACAAGTCTATACTAAATGGTCCAAATTTCACAACTTCACCCTTGGAGATTCACTTTTGTTTCTATATCCACCAAGTCAAGATTCATTGATTCAAGTAACACAAGAATCATACAAGAGTTGCAACACTAAAGATCCAATATTATTTATGAACAATGGTAACTCTTTGTTTAACATAACATCAAAAGGTGATTTTTATTTCACAAGTGGAGTAAATGGTCATTGTCAAAAGCATCAAAAGATTCATATATCTGTTGGAGGAATAggaaatgttgatgatgatgctaATAGTCCAAGTTCATTGCCTGCAAATGGACCCTCTTATCAAAATGTATTTGGAAGCATTCCAATAGCTCCTTCTACATCAAATTCACCTCACTTAACTTCAACTTTTCATGTTCTTATTATTGGATCTATCATATATGCAATGTTCTTTACTTTAATGTAA 573 0.3176 MAIKNFLVSLMLITLLQIQTKVFCFQYQVGDLNAWGIPTSTNSQVYTKWSKFHNFTLGDSLLFLYPPSQDSLIQVTQESYKSCNTKDPILFMNNGNSLFNITSKGDFYFTSGVNGHCQKHQKIHISVGGIGNVDDDANSPSSLPANGPSYQNVFGSIPIAPSTSNSPHLTSTFHVLIIGSIIYAMFFTLM 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03214 190 PANTHER BLUE COPPER PROTEIN 6 183 IPR039391 GO:0009055
Tsu01g03214 190 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Tsu01g03214 190 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Tsu01g03214 190 CDD OsENODL1_like 25 127 IPR041846 -
Tsu01g03214 190 Gene3D - 24 130 IPR008972 -
Tsu01g03214 190 PANTHER MAVICYANIN 6 183 - -
Tsu01g03214 190 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03214 Tsu-Chr1 39725335 39726334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03214 11 159 Phytocyanin Superfamily AT1G64640 59.732 2.29e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03214 - - gmx:100527517 274.248