Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03206 ATGGCAGTGACAATGCCTCTTAGTTTAAGGAATAAGCTTAAGACTCTTTGTGGTTATGGTGATGGTTGGTCTTATGCCATTTTTTGGCGTTTTCATGAGAAGAATCCtatGTTGTTGAATGTGGAAGAAGCATACTATGAAGAGCAATTAGGAGAAGTGATTCCAAACATGATTCCACAAGTACATTTGTTGGGTGAAGGaattGTTGGTGAAGCTGCTTTCACAAACAAGCACAGTTGGTTGCATTCAGTTAGTTATGAGGTTGATTCTGGATTGTATCAACAATTCTCCTCTGGAATAATAAAGACAATTGTGGTTATACCTGTCAAAGCATGCGGTGTGGTACAGTTTGGATCCAGAAATACGATTTTGGAGACAAATGATTTTTTGGATCAAACACGAAGTTTACTCAACGAGATAGACGATATCAGCATGATAGGCGACTCAGAAAATGTCGTTTTTCCATTTGATTTTACAAATGATGATCTCGATGGATTGTTAGCTTCCATTTCCTCTGAAAGTTCATGTGATTGGAATCTCAAATATGTGCACGATGAAAACCATAACGATCTGAGAGAAGTTTTTTATTCTTGTGAAGAAATGATAACTTCATCAGAATTTGATTCCTCATCTCTTAATGACCAATTGAAATGTACTATAGAAGCTTTTTTGGAGCCTAACTCTTCTATGGACAACTTGATTTCCCAAAATACCCCCCTTTTCGATGAAAATCTTTGTTTTGATTCATTGGAGCAACTATTCGCATCTGAAACAATGGCACAAGAAGTGTGCACTTCATTTGCTAGCAACATAGTTCATGATTCATCATTGACTTCATTGCAAAATTCAATGGATAATGTTGCGGCAGAAGTTGATTTACCGGCAAGTTCAGGTACTCTCAATGGAATCTCTAGTAGCTTAGAGCCGATCGATATGTCAGAAGAAATTTTGAAGTTCAGTTCCATGGATGATCTTAGTCAATGGTTTGCTCCTTCACCAGAAGATACCGGTAGCTGCAGAACAATGATTCAATTGAATAATAACGTTTCTGAACCGATAGAATTTAACCCTACTTGTTCTGATCTAGGCCTAGTCGAGAAAGAAACATCTGTAGTAATACATAGTTCCGAGAATGATCTCTTGGATaactttgaatttgatttgGGATGTGATCAAGGTAGTGAATGGTGGGTGAATTTACTTACGCCAGTGGTGAGTGCGGATACTGATAATACCGGCTTTTCTGAATGCATATCAGAGTTGAATACTAGTACACCGACCGATAATACTCGGAAGAGGTTATTCGCAGAATTAGGAATTGAAGAGCTTTTGAGAggtgaaaaaaattacatcaatcCTTTTAATAGTTCTAGTTTTGAAAATGagttatcatcatcatcaaataagAAGCATATGGTGGAATTTTCACCTATGAATAGAACATCATCGCATTTCGGAAACATTGATGGAGCTGAAACTAGAGCAAACTTGATACATTCTGTTTATGAATTCGATAAGTCCAATAGTGTTTTAACTACGAAAGATACATTCCCGAAATTACAAGTAGGTATGTTGGCTAATGATCGAAATAGCATCAATATCAAGAATGCTGTTTCGGTACAACCTAGAAGATCAGAAGAGCCCATGAAACCTACAAAGAAGAAGGCTAAGCCGGGGGAGAGTACTCGTCCGCGACCAAAAGATCGGCAGCAGATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCTCATGGCGGAAAGTGTAGCATCGATTCTTTGTTAGACCGCACGATCAGATACATGCTTTTCTTACGCGGAATCATTAAATATGCAGATATACTACAAGAGCCTAATGAGCCTAAGCTTATTGACCAAGAAAGTGAAGTGATTCCAAAAGACAAAAACCATGGTGCTACATGGGCATTTGAAGTAGCAAACCAAACAATGGTATGTCCAATTATAGTCGAAGACATGAATCCACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGATCAAGGTTTCTTCCTTGAGATAGTCGACATAATTCGAGGTTTCGGGCTGAATATTTTGAAAGCAAAGATGGATTTAAGGAAGAATAAGCTATGGGCGCGCTTTATTGTTGAGGCAAATCGACATGTGACAAGGATAGATGTGTTTTGGTCACTTATTCATCTTCTACAACAACCAAACGCCGCCGGAATTGATTCTTCTAATAAACATGGCAATATTATTCCTTCCAACATTGCTTAA 2256 0.3728 MAVTMPLSLRNKLKTLCGYGDGWSYAIFWRFHEKNPMLLNVEEAYYEEQLGEVIPNMIPQVHLLGEGIVGEAAFTNKHSWLHSVSYEVDSGLYQQFSSGIIKTIVVIPVKACGVVQFGSRNTILETNDFLDQTRSLLNEIDDISMIGDSENVVFPFDFTNDDLDGLLASISSESSCDWNLKYVHDENHNDLREVFYSCEEMITSSEFDSSSLNDQLKCTIEAFLEPNSSMDNLISQNTPLFDENLCFDSLEQLFASETMAQEVCTSFASNIVHDSSLTSLQNSMDNVAAEVDLPASSGTLNGISSSLEPIDMSEEILKFSSMDDLSQWFAPSPEDTGSCRTMIQLNNNVSEPIEFNPTCSDLGLVEKETSVVIHSSENDLLDNFEFDLGCDQGSEWWVNLLTPVVSADTDNTGFSECISELNTSTPTDNTRKRLFAELGIEELLRGEKNYINPFNSSSFENELSSSSNKKHMVEFSPMNRTSSHFGNIDGAETRANLIHSVYEFDKSNSVLTTKDTFPKLQVGMLANDRNSINIKNAVSVQPRRSEEPMKPTKKKAKPGESTRPRPKDRQQIQDCIKELRGIIPHGGKCSIDSLLDRTIRYMLFLRGIIKYADILQEPNEPKLIDQESEVIPKDKNHGATWAFEVANQTMVCPIIVEDMNPPGQMLIEMLCEDQGFFLEIVDIIRGFGLNILKAKMDLRKNKLWARFIVEANRHVTRIDVFWSLIHLLQQPNAAGIDSSNKHGNIIPSNIA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03206 751 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 7 749 - -
Tsu01g03206 751 MobiDBLite consensus disorder prediction 534 571 - -
Tsu01g03206 751 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 58 136 IPR025610 -
Tsu01g03206 751 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 569 611 IPR036638 GO:0046983
Tsu01g03206 751 MobiDBLite consensus disorder prediction 546 571 - -
Tsu01g03206 751 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 749 IPR043561 GO:0003700|GO:0006355
Tsu01g03206 751 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 556 605 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03206 Tsu-Chr1 39624213 39628205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03206 547 738 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.608 1.96e-62 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03206 - - cam:101509177 1025