Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03178 ATGAAGTTAACCAGCTTTTATGTGGTACTGAGCTTCATCAGGCAGACGGTGAAAGAAGACAAAACTCTTGTATATGAGGACTGGCAAGAGAATATTCTACCCCTGTTGGAATCAGAACCTTCAAAGCTTAACCCGACATTCTTTGGTGTGGAACAATACTTTGCAGCCAAAAGTCTTATTTCTTCGCGATCTTTCGAGATAGATGATTACCATGGTTTTGGCATGGTTCCCTTGGCAGATCTATTCAATCATAAAACTGGTGCAGAAGATGTGCATTTCACTGCTTTGTCTTCTAATGATGAATCTGACGATGATGACGTTGTGGATGATTTTGATGAGGGCATTGTTGATGAAGAAGCATTGGCTCAAAATGGCGCTATGGATAAGACTGAGAACGGTGGTGTTAGCGACATGGAGTATTCTTCAGTTACCGAGGATTATACTTCAATGCTGGAGATGGTTATGATAAAGGATGTCAGCAGTGGAGTTGAGGTATTTAATACTTACGGCATATTGGGCAATGCCGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAACACCTATGATATTGTGAACATTGATTTGGAACTAGTACTTCAATGGTGTTCTTCTTTGTTCTCTGACCGCCACAGCCGATCAAGAATCTCCCTTTGGAGAAGGTTAGGCTATTCCAGTGACAGCGAAAACTCTGAATATTTCGAGATATCATTTGACGGAGAACCACATATCGAACTCCTCATTTTATTATACATCATATTTTTAACAGATGATGTTTACCATAAATTAGACTTATCAGTAGCAATTGCTGGAAATTGTCATGAATCAAGTGAAAAAACCAGTTTTTTGAATGGTGATAATATCTTTTTAGACAAAGCATCTAATATGAGCAAGAAAACTTTGCTGACAAAAAAAGTTTGTGATGCTTTGTTGTCACTTGCTGATTTAAGGGAGAGTCTATATGGTTTGAAATCAATAGAAGATGATATTGAGGCATTGGAAAGGTGTAGTTTTGTTCGTGATAGAAAGCTGTATCACTCTTTGGTTCTGCGTATCAGTGAAAGGAAGATCCTTCAAAAACTCAGAAATTATGCTTCAAAGTCGTGTGAGTTTACTAACCCTATTTCTGCTGGGAAGAAGTCGAAAAAGACAACAAAGAGGAAAAgatag 1173 0.3794 MKLTSFYVVLSFIRQTVKEDKTLVYEDWQENILPLLESEPSKLNPTFFGVEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTALSSNDESDDDDVVDDFDEGIVDEEALAQNGAMDKTENGGVSDMEYSSVTEDYTSMLEMVMIKDVSSGVEVFNTYGILGNAALLHRYGFTEQDNTYDIVNIDLELVLQWCSSLFSDRHSRSRISLWRRLGYSSDSENSEYFEISFDGEPHIELLILLYIIFLTDDVYHKLDLSVAIAGNCHESSEKTSFLNGDNIFLDKASNMSKKTLLTKKVCDALLSLADLRESLYGLKSIEDDIEALERCSFVRDRKLYHSLVLRISERKILQKLRNYASKSCEFTNPISAGKKSKKTTKRKR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03178 390 Gene3D set domain protein methyltransferase, domain 1 10 183 - -
Tsu01g03178 390 Gene3D - 186 374 IPR036464 -
Tsu01g03178 390 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 15 370 - -
Tsu01g03178 390 SUPERFAMILY SET domain 13 91 IPR046341 -
Tsu01g03178 390 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 15 370 - -
Tsu01g03178 390 SUPERFAMILY SET domain 148 188 IPR046341 -
Tsu01g03178 390 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 180 381 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03178 13 388 NAC Transcription Factor Family AT3G56570 51.951 4.13e-119 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03178 K05302 - vra:106769924 514.612