Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03164 ATGTTTTTCTTCACAAACCCAACATGTGTTTGTGGGAATATAGAGTTAAGAGCATTAATGGCCATGAAAGCTAGCTTAGACCCAAAGAATCATGTTTTATCATCTTGGTCCATCAATGGTGATCCATGTGGTGAATCTTTTGAAGGAGTAACATGCAATGAAAAGGGTCAAGTTGTTAACATTTCTTTGCAAGGAAAAGGTTTATCAGGGAAGCTTTCATCAGCCATTGTTGGTCTTAAACATTTGACAGGACTTTACTTGCATTATAATTCTTTGTATGGTGAGATACCAAGGGAAGTTTCGAATTTGACTCAACTTGGTGAGTTGTATTTGAATGTGAATCAATTTTATGGGGAAATTCCTATTGAGATTGGTAGATGGAGAATTTACAAGCTTTCATATAATCTATTGACAGGAAGAATACCTGCACAAATTGGTGCTTTGAAAAAGTTAAGTGTTACTGCTTTGAAGTCAAACCAATTAACTGGTGCTATCCCTGCTAGTCTAGGAGATTTGGATATGCTGGTGAGACTAGATTTGAGCTCTAACAATCTCACTGGTTCCATTCCCACTAGCATAGCTAGTGTTCCTTCATTGAAAGTTTTGGATGTTCACAACAATACACTTTCTGGGAATGTTCCTCCTGCTCTTAAGAGACTACATGATGGATTTTTATATGAACACAATATGGGGCTATGTGGAGTTGGGTTTCCATCCTTGAAAACTTGCAATACAAGCAAAGATGGATCATCAACAAAACATATCCCAGAAATTGCAAATATGACGTTATCTTGCAATGGAAGTCAATGCCTTCATTCATCCAAATTcaatcaaaccaaatcaattATTGTTGGCATATCTGTGGTTATGATTTCAGTGTTGGCAATTGGTATATTAGCCTTCACAATATATCTGTGTCGAAGAAAACAAAATCTTGAAACTTCTTTTCATATCTCTAATAGTCGTCCAAGTACCGACCAGGCCAAGGGTATATACCGGAAAAATGAGTCTCCTTTTCCCTGCCTTGAGTACTCTACTAGATCTGACCCTTTGGTGGATTATAGAGATTTCGACGGTGATAGCCAAGACAGGTTCCGTAGTTTCATGTTCAACTTGGAAGAAGTGGAGTTAGCCACTCAAAATTTCGCGGATTCGAATTTGTTAGGCAAGAATGAATTTTGTGCAACATATAAAGGCGTTTTAAGAGATGGATCTGTTGTTGCTGTGAAGAGCATTAGTAAAAATAGTTGCAAgtatgatgaagaagaagtttTGAAGATATTGAACAGTTTGGCATCAATGAAGAATGATAATTTAGTAAGGTTGAGAGGATTTTGTTGTTCAAGGGAACAAGATGAATGGTTTTTGATCTATGATTTTGTTCCTAATGGAAAAATGTCACGTTTCCTTGATTTGCAAGAAAGTGATGAAGAAGTGCTTGAATGGTCAACTAGAGTTTCTATTGCAAAAGGAATTGCTAAAGGTATGGCATATTTGCATTCAAACAAAGCAAACAAACCCATCATTATTCACCAAAACATCTCAAGTGACAAAATTCTAATAGATCAGAGGTACAATCCATTGTTGGATGATTATGGCCTGTACAAGCTTCTTACAAATGATATTGTCTTCTCTGCACTTAAAGCTAGTGAAACAAAGGGTTACATGGCTCCCGAATACACAAACACGGGTCGATTTTCGAAGGCAAGTGATGTTTATGCTTTTGGAATGGTACTTTTCCAAATCCTTTCAGGGAAACAAAAGATAACTAGCTCAATAATGCTTGCTGCAGAGTCCTTCAATTTCAAGGAATTTATTGATCCAAATCTTAATGGAAGATTCTTTGAATGTGATGCAGCTAAATTGACAAAAATAGCTTTGTTTTGCATGCATGAGTCTCCATTTGAGAGGCCATCTATGGAAGCAATTGTTAAAGAATTGAGCAATTGTACTAGCTGTCTTTGA 1965 0.3603 MFFFTNPTCVCGNIELRALMAMKASLDPKNHVLSSWSINGDPCGESFEGVTCNEKGQVVNISLQGKGLSGKLSSAIVGLKHLTGLYLHYNSLYGEIPREVSNLTQLGELYLNVNQFYGEIPIEIGRWRIYKLSYNLLTGRIPAQIGALKKLSVTALKSNQLTGAIPASLGDLDMLVRLDLSSNNLTGSIPTSIASVPSLKVLDVHNNTLSGNVPPALKRLHDGFLYEHNMGLCGVGFPSLKTCNTSKDGSSTKHIPEIANMTLSCNGSQCLHSSKFNQTKSIIVGISVVMISVLAIGILAFTIYLCRRKQNLETSFHISNSRPSTDQAKGIYRKNESPFPCLEYSTRSDPLVDYRDFDGDSQDRFRSFMFNLEEVELATQNFADSNLLGKNEFCATYKGVLRDGSVVAVKSISKNSCKYDEEEVLKILNSLASMKNDNLVRLRGFCCSREQDEWFLIYDFVPNGKMSRFLDLQESDEEVLEWSTRVSIAKGIAKGMAYLHSNKANKPIIIHQNISSDKILIDQRYNPLLDDYGLYKLLTNDIVFSALKASETKGYMAPEYTNTGRFSKASDVYAFGMVLFQILSGKQKITSSIMLAAESFNFKEFIDPNLNGRFFECDAAKLTKIALFCMHESPFERPSMEAIVKELSNCTSCL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03164 654 Pfam Leucine rich repeat N-terminal domain 15 53 IPR013210 -
Tsu01g03164 654 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 652 - -
Tsu01g03164 654 ProSiteProfiles Protein kinase domain profile. 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03164 654 SUPERFAMILY Protein kinase-like (PK-like) 364 647 IPR011009 -
Tsu01g03164 654 Gene3D Ribonuclease Inhibitor 14 126 IPR032675 -
Tsu01g03164 654 SUPERFAMILY L domain-like 9 220 - -
Tsu01g03164 654 Gene3D Ribonuclease Inhibitor 131 237 IPR032675 -
Tsu01g03164 654 Gene3D Transferase(Phosphotransferase) domain 1 462 653 - -
Tsu01g03164 654 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 2 652 - -
Tsu01g03164 654 Pfam Protein tyrosine and serine/threonine kinase 387 647 IPR001245 GO:0004672|GO:0006468
Tsu01g03164 654 Gene3D Phosphorylase Kinase; domain 1 358 460 - -
Tsu01g03164 654 Pfam Leucine rich repeat 155 209 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03164 Tsu-Chr1 39068547 39071703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03164 2 495 Miscellaneous Gene Families AT4G22730 49.808 8.34e-164 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Tsu01g03164 PK_Tyr_Ser-Thr 7.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03164 - - gmx:100775422 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03332 06 44303026 44307403 Tsu01g03164 01 39068547 39071703 PCT