Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03136 ATGAAACCGCCATTGCAACAACCAACGCCACGTCCTCCCACCATTCTCGGAAAATACCAACTAACCCGCCTCCTCGGCCGCGGCAGCTTCGCCAAAGTCTACCAAGCCCGTTCCCTCCTCGACTCCTCCACCGTCGCCGTCAAAATAATAGACAAATCCAAAACCGTCGATGCCGCAATGGAGCCACGTATAATCCGCGAAATTGACGCTATGCGCCGTCTCCACAACCACTCTAACATTCTCCAAATCCACGAAGTCATGGCAACAAAAACTAAGATCCATCTCGTTGTCGAATTCGCCGCTGGCGGTGAGCTTTTCACCGCTCTCTCTCGCCGTGGACGGTTATCCGAATCCACCGCTCGTTTCTACTTTCAACAGCTTGTTTCTGCACTACGTTTCTGCCACCGTAACGGCATCGCTCACCGTGATCTCAAGCCACAGAATCTCCTCCTCGATGCTGAAGGTAATCTCAAGGTCTCCGACTTCGGCCTCTCTGCTCTCCCGGAACACCTAAAAAACGGCCTCCTCCACACTGCCTGCGGCACGCCGGCGTACACAGCACCGGAGATTCTCCGACGCAGTGGCGGTTACGACGGATCCAAAGCGGATGCGTGGTCCTGTGGCCTCATACTCTACGTACTTCTCGCCGGTTACCTTCCTTTCAGCGACTTAAATATTCCGGCGATGTGTAAGAAAATTTCCCGGCGAGATTACCAGTTTCCAGATTGGATTTCAAAACGGGCGCGTTTCGTGATATATCGGTTACTTGACCCGAATCCAGGAACCCGAATGAGTTTGGAGGCTTTATTTACGAACGAGTGGTTTAAAAAATCGTTAAaacccgaacccgaacccaaaaAGAGTATGTTCGGGTTTGATTACGGAAACGAAGTGAAAATATCGGGTTTAAACGCGTTTCATATAATATCTATGTCTTCGGGTTTGAATTTAAGTGGGTTATTTGAAACGACGTCGTGTCAAggtgaaaataataaaagtattaaTAGGAGAGAGAAGAGGTTTACTTCAAGTGCAAAAATGGAAGTGATGGAGGAAAAGGTGAAAGAAGTAGGAGGGGTTTTTGGGTTTAAGGTTGAGATTGGGAAGAATAATGCAATTGGGTTAGTGAAAGGGAAAGTGGGTTTAGTAGTTGAGGTGTTTGAGATTGTGCCTTCACAACTTCTTTTGGTGGATGTTAAGGTGGTAGAGGGTGGTTTGGAGTTTGAGGATAATCATTGGGAGGAATGGAAAGTTGCTTTGCAAGATCTTGTGATTTCATGGCACAATGAAGAAGAGTCTTTATGA 1305 0.4636 MKPPLQQPTPRPPTILGKYQLTRLLGRGSFAKVYQARSLLDSSTVAVKIIDKSKTVDAAMEPRIIREIDAMRRLHNHSNILQIHEVMATKTKIHLVVEFAAGGELFTALSRRGRLSESTARFYFQQLVSALRFCHRNGIAHRDLKPQNLLLDAEGNLKVSDFGLSALPEHLKNGLLHTACGTPAYTAPEILRRSGGYDGSKADAWSCGLILYVLLAGYLPFSDLNIPAMCKKISRRDYQFPDWISKRARFVIYRLLDPNPGTRMSLEALFTNEWFKKSLKPEPEPKKSMFGFDYGNEVKISGLNAFHIISMSSGLNLSGLFETTSCQGENNKSINRREKRFTSSAKMEVMEEKVKEVGGVFGFKVEIGKNNAIGLVKGKVGLVVEVFEIVPSQLLLVDVKVVEGGLEFEDNHWEEWKVALQDLVISWHNEEESL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03136 434 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 430 - -
Tsu01g03136 434 SUPERFAMILY Protein kinase-like (PK-like) 15 291 IPR011009 -
Tsu01g03136 434 Gene3D Kinase associated domain 1, KA1 299 425 - -
Tsu01g03136 434 SMART serkin_6 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03136 434 Pfam NAF domain 303 366 IPR004041 GO:0007165
Tsu01g03136 434 ProSiteProfiles Protein kinase domain profile. 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03136 434 CDD CIPK_C 304 421 - -
Tsu01g03136 434 Gene3D Transferase(Phosphotransferase) domain 1 105 292 - -
Tsu01g03136 434 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Tsu01g03136 434 Pfam Protein kinase domain 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03136 434 PANTHER SERINE/THREONINE KINASE 11 430 - -
Tsu01g03136 434 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Tsu01g03136 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Tsu01g03136 434 Gene3D Phosphorylase Kinase; domain 1 21 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03136 Tsu-Chr1 38606267 38607579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03136 5 429 CBL-interacting serine-threonine protein kinases AT4G14580 57.991 8.82e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu01g03136 Pkinase 2.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03136 K12761 - gmx:100784173 613.994