Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03120 ATGGTTGCAATCTATGTAGCACCGACAATTCACATTGAAGTCATGTCTGGTGTTCAAAACGTGGCAGATAATACTTGGAAAACAATACAGGATCATCTTTTCACTTCTGAAGGAAAAGTTATGACAGCTGAAAATTTTCCTTCAACTCCATTGGTAACCAAAAAAAGGAAGAACTCTCAATCCTATTCAAAATCCAAAGCAAAAAAGGCCAAAACAGcttcaaaacaaattaagaaatatgtaagaaaaggaaagaagattcaagaaaagCCAAAACAGCTGCAAGAAGAACTACCTATCACTCTACAAGATGTTAAGAAAGAGGTGAAACAACAAGGTGGAATAGAAATTTTGGATGAAGTTTCTACAATTCTATCTGCTAGAAGAGCAAAAATTGCAGCGAGAAAAAAGTTTATCAGAACTGAATTAACTCCTACTGCTCAACCTGACAAAGTCGCAGTTGATCATCAAAAGAAAGACGATAATTGCCCCCGGCTTGAAACAGTCACTGATACTCCAAAAATCAGATTTAAGAATTCTTCGAAACCAGAATCATCAAGTCAAAAAATAGTGTTCAAGAATGTTTCAAGGGACAATGCTGAATCATGGAAAGAAAAAGCTGCTTGTGAGCCATTGAATTGGTTGGTGGAaaccacaaacaaaaacaagtcTCTTAATAACTCAACCATGCAAGAAAATGGTGTCATTCCAATGCTTGTCGATTCTAGTGACAATGATTCTCATCATGTGACTAAGTTTGAAGTTATGAAACATTGTAATAACCACCAAACAGAAGCAGAAGGTGATCAAAATGATCCAAAATTATCTTCCTTGAAGTTTAAGCTTAAAAGGGTGGaagaaaaaagagtaaaattttTTGAGGACTTGAATCTTCCAGCACTACCTGAAAATGAAAGTAATGAAGACTTTGGTTCTTTCTGGTTCTCCTTAGTTGCTTCCAAAGAGCAACAGATTTCACACTTAACAAATCTTCACATTATTATTTATAGGGATGGAAGTTTACCTGTTTCACATATCAAAAAGTATATAGTAAAGAAGCTTAATCTTGCTAGTGAAGATGAGGTGGAGATTTTATTAGGAGATAAGCCAGTTTTATGTTCAATGCAGCTGCAAAACTTAATGGAACTGTGGTTGGAAACAATGTCAAAGAATGAAAGAGTTGAAACATCAGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCGTACCGTCGAAAGGCTTGA 1248 0.3357 MVAIYVAPTIHIEVMSGVQNVADNTWKTIQDHLFTSEGKVMTAENFPSTPLVTKKRKNSQSYSKSKAKKAKTASKQIKKYVRKGKKIQEKPKQLQEELPITLQDVKKEVKQQGGIEILDEVSTILSARRAKIAARKKFIRTELTPTAQPDKVAVDHQKKDDNCPRLETVTDTPKIRFKNSSKPESSSQKIVFKNVSRDNAESWKEKAACEPLNWLVETTNKNKSLNNSTMQENGVIPMLVDSSDNDSHHVTKFEVMKHCNNHQTEAEGDQNDPKLSSLKFKLKRVEEKRVKFFEDLNLPALPENESNEDFGSFWFSLVASKEQQISHLTNLHIIIYRDGSLPVSHIKKYIVKKLNLASEDEVEILLGDKPVLCSMQLQNLMELWLETMSKNERVETSVGSSAKDFVMVLSYRRKA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03120 415 MobiDBLite consensus disorder prediction 46 75 - -
Tsu01g03120 415 MobiDBLite consensus disorder prediction 59 75 - -
Tsu01g03120 415 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 122 414 IPR044807 GO:0004842
Tsu01g03120 415 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 122 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03120 Tsu-Chr1 38392372 38395198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03120 333 414 C3H Transcription Factor Family AT3G23060 46.341 2.93e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03120 K16277 - lja:Lj5g3v1204350.1 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03120 01 38392372 38395198 Tsu07g04583 07 50534516 50540992 ECH
Tsu01g03120 01 38392372 38395198 Tsu01g03120 01 38392372 38395198 ECH