Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03085 ATGAGAATCAGACATCTTCATATCAAGCTCAAGGCATTTAGGTTGAAAAGGTTTCTGCTAAGATTTCTAAGCAGAAAGAGAAGGCTATTGCCAGCAAAAAAGCCTTCATGGATGACACCAGTAACACATGGTTATCAAGTGGTGGAACATCATATGATAAGAGATGGTTCTGATTACTCAGACATTGATTCAATTGTGGTACAAAGAGAGCAAATGGATCAAACTGAATTGTGGTATTTTGGAATATTTGATCCATTAGTTGGAGACAAGGTTACCAAGTACATGCAATCTCATTTCTTTACAAAGAAGCTTCAAGAGGCTCAAATATGGAGAAAAAGCAAAGAAATGATGAAGAGAGCTTATCTTGGTGTAAGGTCAAAGATGAAAGAAGAACAAAGATATGAAGACACATGTAGAATGAGTTCAGCATCTGTTATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTATAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAACTGATACATACCAACAATCAGTCAAAAGACATTGGTCTCGCAGAATATTTTCAGCATATGAATCAGGAAATGCAGTAGCTACCAAGCATTCTAGCAACTCAGAACTTGTCATCAGAAGTGAAAGAATTGATTCTGATACTGAGTTTTTGATATTAGCAAGTAATGGTATATGGGAGGTGATGAAGAATCAAGAGGCTGTGAATCTAATAAGCCACATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAATGAAGCACTAAATAGAATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGATTGA 837 0.3596 MRIRHLHIKLKAFRLKRFLLRFLSRKRRLLPAKKPSWMTPVTHGYQVVEHHMIRDGSDYSDIDSIVVQREQMDQTELWYFGIFDPLVGDKVTKYMQSHFFTKKLQEAQIWRKSKEMMKRAYLGVRSKMKEEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKTDTYQQSVKRHWSRRIFSAYESGNAVATKHSSNSELVIRSERIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLANEALNRMSKSNISCLIIRFD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03085 278 ProSiteProfiles PPM-type phosphatase domain profile. 59 277 IPR001932 -
Tsu01g03085 278 PANTHER ALPHABET, ISOFORM E-RELATED 6 277 - -
Tsu01g03085 278 CDD PP2Cc 63 277 IPR001932 -
Tsu01g03085 278 SUPERFAMILY PP2C-like 65 278 IPR036457 -
Tsu01g03085 278 SMART PP2C_4 40 275 IPR001932 -
Tsu01g03085 278 Gene3D - 55 278 IPR036457 -
Tsu01g03085 278 Pfam Protein phosphatase 2C 77 180 IPR001932 -
Tsu01g03085 278 Pfam Protein phosphatase 2C 212 270 IPR001932 -
Tsu01g03085 278 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03085 Tsu-Chr1 37938659 37940847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03085 1 277 PP2C-type Phosphatase Gene Family AT3G23360 50.360 4.60e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03085 K19704 - gmx:100785227 387.882