Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03075 ATGGCTCCTACACCTTCTTCCAAGCAAATGCATTCTACCCATTTAATAACTCCACGTTCAAAGCATCGTCTCAATTTCAATAGCCACAAAGCAGCACCAACACCACCACATCCACATCCATCACCGAATCCTAATTTCAAAGAATCCCCTCATGAACACCCAATTGAAGTTATTGCTAGAATTCGCGACTACCCAGATCGAAAAGACAAGCCTTTATCGGTTCTTATGGCGAGTTCAAACTCTAGATCTATTAGGGTTCGTGCTGATTTTGGGTATAGGGATTTTACCCTTGATGGGGTATCTGTTTCTGAGGAAGAGGAATTGGATTTGTTCTATAAGAAATTTGTGGAATCAAGGATCAATGGTGTTAAATTAGGGGATAAATGTACTATTATGATGTATGGACCAACTGGTTCTGGTAAGAGTCATACCATGTTTGGTTGTTCAAAGCAAGCTGGGATTGTGTATAGGGCTTTGAGAGATATTCTTGGTGATGGTGATACAGATTCTGAGGGTGGTGGAGATGGAAGTGATGGTGATTCTAGAGGAATGTGTGTTGGATTGAGAACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAAGAGATTTATGATCTTTTGTCTACCAAtggaggtggtggtggaggTGGAGGGTTCGGATTCGGTTGGTCTAAGGGCAATGCTTCAAAGGTCAAACTTGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGCAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGGAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTGATACTCGATGTCCCAACAGTGGGAGGGCGGCTAATGCTTGTTGACATGGCAGGATCAGAAAATATCGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCACTGAAGAGAGTGGTTGAGTCAATTGCAAATGGCGATTCACATGTGCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGATTCATTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCTACACTGGAATATGGAGCCAAAGCAAAATGTATAGTTCGTGGTCCTCATACTCCGGTTAAGGAGGAGGACTCTTCTTCAACTGTCATTTTGGGATCGAGAATTGCTGCAATGGATGAATTTATCATGAAGCTACAAATGGAAAACAAACTAAGAGAGAAAGAACGAAACGAAGCACACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGAGTTAAGAGCTAAAATGGAAACAGCTCCTGCAAGTGAGGAGGAGATTAACCTAAAGGTAAATGAACGAACACGCCTTCTGAGACAAGAGTTGGAAAAGAAGCTGGAAGAGTGTCAAAGAATGACTAATGATTTTGTTGAGCTAGAGAGGAAGAGAATGGAAGCACGCATATTGCAGCAGCAAGAGGAAGTTGAAATACTGAGAAAGAGACTGGAAGAAATCGAGTTGCAGTTGCATAGTACTTCAAAGAAAGAGAATATCAATGAAAATGAATCAAAAGAGATAGAGCCAAGTGGGTTTATGAGAAAACTACTTCGTGTTTACAAAAGCGAGGATGATCCTGGAATGGTGAAATCGATGGATTTGGACATGGATGATCAAGAACCACCCTCCCTTGCACGTGAAGTTATTGTCGGCATGCAAGGCATTTCACCAAATCAACCTCATTCAATGGTACAAGAAGATGCTTATGCTTGTGCAccaaactttggtcaaaaagCATGTCTAAGTACAGTATATGAAGAAGAAGGAGAGGGAGAGCAAGATCATGAGGATAAAGTGGAAGAAGATGAGGAAGTAGAGAAAGAAGTGATAGAGGAAAAAAGGGTTTGTAGTGTTAGCAAAAGTCCAAAGAGAGAAGATTATTCTTCTGAAGCTGACAAGGAAAACAATGGTTCCAATAGACTACTAAGGATTCATAACATATTCACTCTTTGTGGAAACCAAAGAGAACTCTCTCAATATGGAACTCCAATCCCTACAAAAAAGAGGTCTGATGAAGGTTTGGATTTTGATCTCAAATATTCTCCTGTGAAATCAAGTGAGAAGAAAGATTCTGTCTTAAGAATGTCCAACAAAGAGAACATGGAACAATATGTTGTTGGAAATTAG 2253 0.391 MAPTPSSKQMHSTHLITPRSKHRLNFNSHKAAPTPPHPHPSPNPNFKESPHEHPIEVIARIRDYPDRKDKPLSVLMASSNSRSIRVRADFGYRDFTLDGVSVSEEEELDLFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRALRDILGDGDTDSEGGGDGSDGDSRGMCVGLRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKGNASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAELRAKMETAPASEEEINLKVNERTRLLRQELEKKLEECQRMTNDFVELERKRMEARILQQQEEVEILRKRLEEIELQLHSTSKKENINENESKEIEPSGFMRKLLRVYKSEDDPGMVKSMDLDMDDQEPPSLAREVIVGMQGISPNQPHSMVQEDAYACAPNFGQKACLSTVYEEEGEGEQDHEDKVEEDEEVEKEVIEEKRVCSVSKSPKREDYSSEADKENNGSNRLLRIHNIFTLCGNQRELSQYGTPIPTKKRSDEGLDFDLKYSPVKSSEKKDSVLRMSNKENMEQYVVGN 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03075 750 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 PRINTS Kinesin heavy chain signature 271 288 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 PRINTS Kinesin heavy chain signature 344 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 MobiDBLite consensus disorder prediction 33 47 - -
Tsu01g03075 750 ProSiteProfiles Kinesin motor domain profile. 54 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 MobiDBLite consensus disorder prediction 650 677 - -
Tsu01g03075 750 Gene3D Kinesin motor domain 41 398 IPR036961 -
Tsu01g03075 750 PANTHER KINESIN-RELATED 28 710 IPR027640 GO:0003777|GO:0007018
Tsu01g03075 750 PANTHER KINESIN-LIKE PROTEIN KIN-10A 28 710 - -
Tsu01g03075 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 402 IPR027417 -
Tsu01g03075 750 MobiDBLite consensus disorder prediction 1 50 - -
Tsu01g03075 750 Coils Coil 475 538 - -
Tsu01g03075 750 MobiDBLite consensus disorder prediction 727 750 - -
Tsu01g03075 750 Coils Coil 432 459 - -
Tsu01g03075 750 Pfam Kinesin motor domain 79 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 SMART kinesin_4 52 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03075 750 MobiDBLite consensus disorder prediction 629 649 - -
Tsu01g03075 750 MobiDBLite consensus disorder prediction 628 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03075 Tsu-Chr1 37761240 37764605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03075 109 405 Calmodulin-binding Proteins AT5G65930 27.389 9.40e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03075 - K10398 gmx:100786278 1026.93