Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03069 ATGGAGAAAATAGGAGTAGTATTATCGGCGAAAGAGGCATTTGAGAAGCTAGAGAAAGTTGGGGAAGGAACGTATGGGAAGGTTTACAGAGCAAGAGAGAAAGCTACTGGGAAGATCGTTGCTCTCAAGAAGACTCGTCTTCATGAGGATGATGAAGGTGTTCCTCCCACCACTCTTCGCGAGGTTTCCATTCTGCGAATGCTCTCTCGCGATCCACATGTTGTTAGGTTATTGGATGTGAAACAAGGTCAGAACAAGGAAGGGAAAACTGTGCTTTACTTGGTTTTCGAGTACATGGATACCGATCTCAAGAAATTCATTCGTACTTTTCGTCAAACTGGACAAAATATCCCACCTCCAGTCATCAAAGGCTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGCCATGGAATCTTGCATAGGGATTTGAAGCCTCACAATCTCTTGATGGACCGGAAAACAATGATGCTCAAAATTGCTGATCTTGGACTTGCTAGAGCATTTACTGTGCCTCTTAAGAAGTACACTCATGAGATACTGACCCTGTGGTATAGAGCTCCTGAAGTCCTTTTGGGGGCTACCCATTACTCAATGGCTGTCGACATATGGTCTGTTGCATGCATTTTCGCTGAACTTGTCACCAAGCAAGCATTATTTCCTGGTGATTCTGAGCTGCAACAACTCCTCCACATATTCAGGCTGTTGGGGACTCCTAATGAAGATATGTGGCCAGGTGTTAGTAAACTAATGAACTGGCATGAGTATCCTCAATGGAGCCCTCAAAGTCTTTCAAAGGCTGTTCCTACTTTGGAAGAGGCTGGACTAGATCTACTCGCTCAAATGCTGCAATATGAACCTGCCAAGCGGATTTCTGCAAAGAAAGCAATGGAGCATCCTTACTTTGATGACCTTGACAAGACCAATCTTTAG 939 0.4452 MEKIGVVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRTFRQTGQNIPPPVIKGLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPLKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEDMWPGVSKLMNWHEYPQWSPQSLSKAVPTLEEAGLDLLAQMLQYEPAKRISAKKAMEHPYFDDLDKTNL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03069 312 SUPERFAMILY Protein kinase-like (PK-like) 11 307 IPR011009 -
Tsu01g03069 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Tsu01g03069 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Tsu01g03069 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03069 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03069 312 PANTHER CELL DIVISION PROTEIN KINASE 8 311 - -
Tsu01g03069 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g03069 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Tsu01g03069 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Tsu01g03069 312 PANTHER - 8 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03069 Tsu-Chr1 37677028 37682766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03069 1 312 Core Cell Cycle Gene Families AT1G20930 84.127 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Tsu01g03069 Pkinase 4.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03069 K07760 - gmx:100808302 586.26